Publications

2019 Publications
Abeler-Dörner, L., Grabowski, M. K., Rambaut, A., Pillay, D., & Fraser, C. (2019). PANGEA-HIV 2: Phylogenetics And Networks for Generalised Epidemics in Africa. Current Opinion in HIV and AIDS, 14(3), 173–180. https://doi.org/10.1097/COH.0000000000000542
Adam, M., McMahon, S. A., Prober, C., & Bärnighausen, T. (2019). Human-Centered Design of Video-Based Health Education: An Iterative, Collaborative, Community-Based Approach. Journal of Medical Internet Research, 21(1), e12128. https://doi.org/10.2196/12128
Adam, M., Tomlinson, M., Le Roux, I., LeFevre, A. E., McMahon, S. A., Johnston, J., … Bärnighausen, T. (2019). The Philani MOVIE study: a cluster-randomized controlled trial of a mobile video entertainment-education intervention to promote exclusive breastfeeding in South Africa. BMC Health Services Research, 19(1), 211. https://doi.org/10.1186/s12913-019-4000-x

Akilimali, N. A., Muema, D. M., Specht, C., Chang, C. C., Moosa, M.-Y. S., Levitz, S. M., … Ndung’u, T. (2019). Cryptococcosis-associated Immune Reconstitution Inflammatory Syndrome is associated with Dysregulation of IL-7/IL-7 Receptor Signaling Pathway in T-cells and Monocyte Activation: JAIDS Journal of Acquired Immune Deficiency Syndromes, 1. https://doi.org/10.1097/QAI.0000000000001946

Ardain, A., Domingo-Gonzalez, R., Das, S., Kazer, S. W., Howard, N. C., Singh, A., … Khader, S. A. (2019). Group 3 innate lymphoid cells mediate early protective immunity against tuberculosis. Nature, 570(7762), 528–532. https://doi.org/10.1038/s41586-019-1276-2

Ardain, A., Porterfield, J. Z., Kløverpris, H. N., & Leslie, A. (2019). Type 3 ILCs in Lung Disease. Frontiers in Immunology, 10. https://doi.org/10.3389/fimmu.2019.00092

Baisley, K., Seeley, J., Siedner, M., Koole, K., Matthews, P., Tanser, F., …, Shahmanesh, M. (2019). Findings from home‐based HIV testing and facilitated linkage after scale‐up of test and treat in rural South Africa: Young people still missing. HIV Medicine, hiv.12787. https://doi.org/10.1111/hiv.12787
Barnhart, D. A., Harling, G., Muya, A., Ortblad, K. F., Mashasi, I., Dambach, P., … Spiegelman, D. (2019). Structural, interpersonal, psychosocial, and behavioral risk factors for HIV acquisition among female bar workers in Dar es Salaam, Tanzania. AIDS Care, 1–10. https://doi.org/10.1080/09540121.2019.1612018

Barteit, S., Jahn, A., Banda, S. S., Bärnighausen, T., Bowa, A., Chileshe, G., … Neuhann, F. (2019). E-Learning for Medical Education in Sub-Saharan Africa and Low-Resource Settings: Viewpoint. Journal of Medical Internet Research, 21(1), e12449. https://doi.org/10.2196/12449

Barteit, S., Neuhann, F., Bärnighausen, T., Lüders, S., Malunga, G., Chileshe, G., … Jahn, A. (2019). Perspectives of Nonphysician Clinical Students and Medical Lecturers on Tablet-Based Health Care Practice Support for Medical Education in Zambia, Africa: Qualitative Study. JMIR MHealth and UHealth, 7(1), e12637. https://doi.org/10.2196/12637

Barton, J. P., Rajkoomar, E., Mann, J. K., Murakowski, D. K., Toyoda, M., Mahiti, M., … Ndung’u, T. (2019). Modelling and in vitro testing of the HIV-1 Nef fitness landscape. Virus Evolution, 5(2), vez029–vez029. https://doi.org/10.1093/ve/vez029

Baschieri, A., Gordeev, V. S., Akuze, J., Kwesiga, D., Blencowe, H., Cousens, S., … Lawn, J. E. (2019). “Every Newborn-INDEPTH” (EN-INDEPTH) study protocol for a randomised comparison of household survey modules for measuring stillbirths and neonatal deaths in five Health and Demographic Surveillance sites. Journal of Global Health, 9(1). https://doi.org/10.7189/jogh.09.010901

Bixby, H., Bentham, J., Zhou, B., Di Cesare, M., Paciorek, C. J., Bennett, J. E., …Gareta,D.,..Tanser,F.,.. NCD Risk Factor Collaboration (NCD-RisC). (2019). Rising rural body-mass index is the main driver of the global obesity epidemic in adults. Nature, 569(7755), 260–264. https://doi.org/10.1038/s41586-019-1171-x

Chimukangara, B., Lessells, R. J., Rhee, S.-Y., Giandhari, J., Kharsany, A. B. M., Naidoo, K., … de Oliveira, T. (2019). Trends in Pretreatment HIV-1 Drug Resistance in Antiretroviral Therapy-naive Adults in South Africa, 2000–2016: A Pooled Sequence Analysis. EClinicalMedicine. https://doi.org/10.1016/j.eclinm.2019.03.006

Closson, K., Dietrich, J. J., Beksinska, M., Gibbs, A., Hornschuh, S., Smith, T., … Kaida, A. (2019). Measuring sexual relationship power equity among young women and young men South Africa: Implications for gender-transformative programming. PLOS ONE, 14(9), e0221554. https://doi.org/10.1371/journal.pone.0221554
Concannon, D., Herbst, K., & Manley, E. (2019). Developing a Data Dashboard Framework for Population Health Surveillance: Widening Access to Clinical Trial Findings. JMIR Formative Research, 3(2), e11342. https://doi.org/10.2196/11342
Cromarty, R., Sigal, A., Liebenberg, L. J. P., McKinnon, L. R., Abdool Karim, S. S., Passmore, J.-A. S., & Archary, D. (2019). Diminished HIV Infection of Target CD4+ T Cells in a Toll-Like Receptor 4 Stimulated in vitro Model. Frontiers in Immunology, 10, 1705. https://doi.org/10.3389/fimmu.2019.01705

Cuadros, D. F., Li, J., Mukandavire, Z., Musuka, G. N., Branscum, A. J., Sartorius, B., … Tanser, F. (2019). Towards UNAIDS Fast-Track goals: targeting priority geographic areas for HIV prevention and care in Zimbabwe. AIDS, 33(2), 305–314. https://doi.org/10.1097/QAD.0000000000002052

Cuadros, D. F., Sartorius, B., Hall, C., Akullian, A., Bärnighausen, T., & Tanser, F. (2018). Capturing the spatial variability of HIV epidemics in South Africa and Tanzania using routine healthcare facility data. International Journal of Health Geographics, 17(1). https://doi.org/10.1186/s12942-018-0146-8

Cuadros, D. F., Tomita, A., Vandormael, A., Slotow, R., Burns, J. K., & Tanser, F. (2019). Spatial structure of depression in South Africa: A longitudinal panel survey of a nationally representative sample of households. Scientific Reports, 9(1). https://doi.org/10.1038/s41598-018-37791-1

Desmond, C., Viviers, A., Edward, T., Rich, K., Martin, P., & Richter, L. (2019). Priority-setting in the roll out of South Africa’s National Integrated ECD Policy. Early Years, 39(3), 276–294. https://doi.org/10.1080/09575146.2019.1572074

Di Tanna, G. L., Raza Khaki, A., Theron, G., McCarthy, K., Cox, H., Mupfumi, L., … Metcalfe, J. Z. (2019). Effect of Xpert MTB/RIF on clinical outcomes in routine care settings: individual patient data meta-analysis. The Lancet Global Health, 7(2), e191–e199. https://doi.org/10.1016/S2214-109X(18)30458-3

Dobra, A., Bärnighausen, T., Vandormael, A., & Tanser, F. (2019). A method for statistical analysis of repeated residential movements to link human mobility and HIV acquisition. PLOS ONE, 14(6), e0217284. https://doi.org/10.1371/journal.pone.0217284
Draper, C. E., Tomaz, S. A., Zihindula, G., Bunn, C., Gray, C. M., Hunt, K., … Wyke, S. (2019). Development, feasibility, acceptability and potential effectiveness of a healthy lifestyle programme delivered in churches in urban and rural South Africa. PloS One, 14(7), e0219787–e0219787. https://doi.org/10.1371/journal.pone.0219787
Dzomba, A., Tomita, A., Govender, K., & Tanser, F. (2019). Effects of Migration on Risky Sexual Behavior and HIV Acquisition in South Africa: A Systematic Review and Meta-analysis, 2000-2017. Aids and Behavior, 23(6), 1396–1430. https://doi.org/10.1007/s10461-018-2367-z

Dzomba, A., Tomita, A., Vandormael, A., Govender, K., & Tanser, F. (2019). Effect of ART scale-up and female migration intensity on risk of HIV acquisition: results from a population-based cohort in KwaZulu-Natal, South Africa. BMC Public Health, 19(1). https://doi.org/10.1186/s12889-019-6494-x

Fakey Khan, D., Suleman, M., Baijnath, P., Perumal, R., Moodley, V., Mhlane, Z., … Wong, E. B. (2019). Multiple microbiologic tests for tuberculosis improve diagnostic yield of bronchoscopy in medically complex patients. AAS Open Research, 2, 25. https://doi.org/10.12688/aasopenres.12980.1
Feigin, V. L., Nichols, E., Alam, T., Bannick, M. S., Beghi, E., Blake, N., … Vos, T. (2019). Global, regional, and national burden of neurological disorders, 1990–2016: A systematic analysis for the Global Burden of Disease Study 2016. The Lancet Neurology, 18(5), 459–480. https://doi.org/10.1016/S1474-4422(18)30499-X
Frank, T. D., Carter, A., Jahagirdar, D., Biehl, M. H., Douwes-Schultz, D., Larson, S. L., … Murray, C. J. L. (2019). Global, regional, and national incidence, prevalence, and mortality of HIV, 1980–2017, and forecasts to 2030, for 195 countries and territories: A systematic analysis for the Global Burden of Diseases, Injuries, and Risk Factors Study 2017. The Lancet HIV, S2352301819301961. https://doi.org/10.1016/S2352-3018(19)30196-1
Geldsetzer, P., Manne-Goehler, J., Marcus, M.-E., Ebert, C., Zhumadilov, Z., Wesseh, C. S., … Jaacks, L. M. (2019). The state of hypertension care in 44 low-income and middle-income countries: A cross-sectional study of nationally representative individual-level data from 1·1 million adults. The Lancet. https://doi.org/10.1016/S0140-6736(19)30955-9
George, S., & McGrath, N. (2019). Social support, disclosure and stigma and the association with non-adherence in the six months after antiretroviral therapy initiation among a cohort of HIV-positive adults in rural KwaZulu-Natal, South Africa*. Aids Care-Psychological and Socio-Medical Aspects of Aids/Hiv, 31(7), 875–884. https://doi.org/10.1080/09540121.2018.1549720
Global Burden of Disease Cancer Collaboration, Fitzmaurice, C., Abate, D., Abbasi, N., Abbastabar, H., Abd-Allah, F., … Murray, C. J. L. (2019). Global, Regional, and National Cancer Incidence, Mortality, Years of Life Lost, Years Lived With Disability, and Disability-Adjusted Life-Years for 29 Cancer Groups, 1990 to 2017: A Systematic Analysis for the Global Burden of Disease Study. JAMA Oncology. https://doi.org/10.1001/jamaoncol.2019.2996
Gosset, A., Protopopescu, C., Larmarange, J., Orne-Gliemann, J., McGrath, N., Pillay, D., … Boyer, S. (2019). Retention in Care Trajectories of HIV-Positive Individuals Participating in a Universal Test-and-Treat Program in Rural South Africa (ANRS 12249 TasP Trial): JAIDS Journal of Acquired Immune Deficiency Syndromes, 80(4), 375–385. https://doi.org/10.1097/QAI.0000000000001938
Gumede, D., Ngwenya, N. B., Namukwaya, S., Bernays, S., & Seeley, J. (2019). A reflection on ethical and methodological challenges of using separate interviews with adolescent-older carer dyads in rural South Africa. BMC Medical Ethics, 20(1), 47. https://doi.org/10.1186/s12910-019-0383-9

Gupta, R. K., Abdul-Jawad, S., McCoy, L. E., Mok, H. P., Peppa, D., Salgado, M., … Olavarria, E. (2019). HIV-1 remission following CCR5Δ32/Δ32 haematopoietic stem-cell transplantation. Nature. https://doi.org/10.1038/s41586-019-1027-4

Hanifa, Y., Toro Silva, S., Karstaedt, A., Sahid, F., Charalambous, S., Chihota, V. N., … Grant, A. D. (2019). What causes symptoms suggestive of tuberculosis in HIV-positive people with negative initial investigations? The International Journal of Tuberculosis and Lung Disease. https://doi.org/10.5588/ijtld.18.0251

Harling, G., Chanda, M. M., Ortblad, K. F., Mwale, M., Chongo, S., Kanchele, C., … Oldenburg, C. E. (2019). The influence of interviewers on survey responses among female sex workers in Zambia. BMC Medical Research Methodology, 19(1). https://doi.org/10.1186/s12874-019-0703-2

Harling, G., Muya, A., Ortblad, K. F., Mashasi, I., Dambach, P., Ulenga, N., … Spiegelman, D. (2019). HIV risk and pre-exposure prophylaxis interest among female bar workers in Dar es Salaam: cross-sectional survey. BMJ Open, 9(3), e023272. https://doi.org/10.1136/bmjopen-2018-023272
Inzaule, S. C., Hamers, R. L., Bertagnolio, S., Siedner, M. J., Rinke de Wit, T. F., & Gupta, R. K. (2019). Pretreatment HIV drug resistance in low- and middle-income countries. Future Virology, 14(6), 427–440. https://doi.org/10.2217/fvl-2018-0208

Khan, P. Y., Yates, T. A., Osman, M., Warren, R. M., van der Heijden, Y., Padayatchi, N., … Pym, A. (2019). Transmission of drug-resistant tuberculosis in HIV-endemic settings. The Lancet Infectious Diseases, 19(3), e77–e88. https://doi.org/10.1016/S1473-3099(18)30537-1

Lee, G. Q., Reddy, K., Einkauf, K. B., Gounder, K., Chevalier, J. M., Dong, K. L., … Lichterfeld, M. (2019). HIV-1 DNA sequence diversity and evolution during acute subtype C infection. Nature Communications, 10(1), 2737. https://doi.org/10.1038/s41467-019-10659-2

Manne-Goehler, J., Geldsetzer, P., Agoudavi, K., Andall-Brereton, G., Aryal, K. K., Bicaba, B. W., … Jaacks, L. M. (2019). Health system performance for people with diabetes in 28 low- and middle-income countries: A cross-sectional study of nationally representative surveys. PLOS Medicine, 16(3), e1002751. https://doi.org/10.1371/journal.pmed.1002751

Manne‐Goehler, J., Siedner, M. J., Montana, L., Harling, G., Geldsetzer, P., Rohr, J., … Bärnighausen, T. W. (2019). Hypertension and diabetes control along the HIV care cascade in rural South Africa. Journal of the International AIDS Society, 22(3), e25213. https://doi.org/10.1002/jia2.25213
Mannell, J., Willan, S., Shahmanesh, M., Seeley, J., Sherr, L., & Gibbs, A. (2019). Why interventions to prevent intimate partner violence and HIV have failed young women in southern Africa. Journal of the International AIDS Society, 22(8), e25380. https://doi.org/10.1002/jia2.25380
Mathenjwa, T., Kim, H.-Y., Zuma, T., Shahmanesh, M., Seeley, J., Matthews, P., … Tanser, F. (2019). Home-based intervention to test and start (HITS) protocol: A cluster-randomized controlled trial to reduce HIV-related mortality in men and HIV incidence in women through increased coverage of HIV treatment. BMC Public Health, 19(1), 969. https://doi.org/10.1186/s12889-019-7277-0
Millar, J. R., Mvo, Z., Bengu, N., Fillis, R., Sprenger, K., Matthews, P. C., … Goulder, P. (2019). Increasing Diagnostic Uncertainties in Children With In Utero HIV Infection: The Pediatric Infectious Disease Journal, 1. https://doi.org/10.1097/INF.0000000000002315  

Muenchhoff, M., Adland, E., Roider, J., Kløverpris, H., Leslie, A., Boehm, S., … Goulder, P. J. R. (2019). Differential Pathogen-Specific Immune Reconstitution in Antiretroviral Therapy-Treated Human Immunodeficiency Virus-Infected Children. The Journal of Infectious Diseases. https://doi.org/10.1093/infdis/jiy668

Naidoo, A., Chirehwa, M., Ramsuran, V., McIlleron, H., Naidoo, K., Yende-Zuma, N., … Padayatchi, N. (2019). Effects of genetic variability on rifampicin and isoniazid pharmacokinetics in South African patients with recurrent tuberculosis. Pharmacogenomics, 20(4), 225–240. https://doi.org/10.2217/pgs-2018-0166
Naidoo, K. K., Ngubane, A., Gaza, P., Moodley, A., Ndung’u, T., & Thobakgale, C. F. (2019). Neutrophil Effector Functions Are Not Impaired in Duffy Antigen Receptor for Chemokines (DARC)-Null Black South Africans. Frontiers in Immunology, 10, 551. https://doi.org/10.3389/fimmu.2019.00551
Naidoo, K., Adeagbo, O., & Pleaner, M. (2019). Sexual and Reproductive Health Needs of Adolescent Girls and Young Women in Sub-Saharan Africa: Research, Policy, and Practice. SAGE Open, 9(3), 215824401985995. https://doi.org/10.1177/2158244019859951

Naidoo, L., Mzobe, Z., Jin, S. W., Rajkoomar, E., Reddy, T., Brockman, M. A., … Mann, J. K. (2019). Nef-mediated inhibition of NFAT following TCR stimulation differs between HIV-1 subtypes. Virology. https://doi.org/10.1016/j.virol.2019.02.011

Ngwenya, N., Ambler, J., & Archary, M. (2019). Qualitative situational analysis of palliative care for adolescents with cancer and HIV in South Africa: Healthcare worker perceptions. Bmj Open, 9(1), e023225. https://doi.org/10.1136/bmjopen-2018-023225
Nimmo, C., Shaw, L. P., Doyle, R., Williams, R., Brien, K., Burgess, C., … Pym, A. S. (2019). Correction to: Whole genome sequencing Mycobacterium tuberculosis directly from sputum identifies more genetic diversity than sequencing from culture. BMC Genomics, 20(1), 433. https://doi.org/10.1186/s12864-019-5841-8
Nkosi, B., Seeley, J., Ngwenya, N., Mchunu, S. L., Gumede, D., Ferguson, J., & Doyle, A. M. (2019). Exploring adolescents and young people’s candidacy for utilising health services in a rural district, South Africa. BMC Health Services Research, 19(1). https://doi.org/10.1186/s12913-019-3960-1

O’Donnell, M. R., Larsen, M. H., Brown, T. S., Jain, P., Munsamy, V., Wolf, A., … Pym, A. (2019). Early detection of emergent extensively drug resistant tuberculosis (XDR-TB) by flow cytometry-based phenotyping and whole genome sequencing. Antimicrobial Agents and Chemotherapy. https://doi.org/10.1128/AAC.01834-18

Ogongo, P., Porterfield, J. Z., & Leslie, A. (2019). Lung Tissue Resident Memory T-Cells in the Immune Response to Mycobacterium tuberculosis. Frontiers in Immunology, 10, 992. https://doi.org/10.3389/fimmu.2019.00992 

Ortblad, K. F., Harling, G., Chimbindi, N., Tanser, F., Salomon, J. A., & Bärnighausen, T. (2019). Does Incident Circumcision Lead to Risk Compensation? Evidence From a Population Cohort in KwaZulu-Natal, South Africa: JAIDS Journal of Acquired Immune Deficiency Syndromes, 80(3), 269–275. https://doi.org/10.1097/QAI.0000000000001912

Ortblad, K. F., Kibuuka Musoke, D., Ngabirano, T., Nakitende, A., Harling, G., Haberer, J. E., … Bärnighausen, T. (2019). The Effect of HIV Self-Testing Delivery Models on Female Sex Workers’ Sexual Behaviors: A Randomized Controlled Trial in Urban Uganda. AIDS and Behavior. https://doi.org/10.1007/s10461-019-02393-z

Osetinsky, B., Hontelez, J. A. C., Lurie, M. N., McGarvey, S. T., Bloomfield, G. S., Pastakia, S. D., … Galárraga, O. (2019). Epidemiological And Health Systems Implications Of Evolving HIV And Hypertension In South Africa And Kenya. Health Affairs, 38(7), 1173–1181. https://doi.org/10.1377/hlthaff.2018.05287
PANGEA Consortium and Rakai Health Sciences Program, Ratmann, O., Grabowski, M. K., Hall, M., Golubchik, T., Wymant, C., … Fraser, C. (2019). Inferring HIV-1 transmission networks and sources of epidemic spread in Africa with deep-sequence phylogenetic analysis. Nature Communications, 10(1). https://doi.org/10.1038/s41467-019-09139-4
Patenaude, B. N., & Bärnighausen, T. (2019). Quality-adjusted life year weights and treatment bias: Theory and evidence from cognitive interviews. SAGE Open Medicine, 7, 205031211985698. https://doi.org/10.1177/2050312119856986

Pillai, N., Foster, N., Hanifa, Y., Ndlovu, N., Fielding, K., Churchyard, G., … Vassall, A. (2019). Patient costs incurred by people living with HIV/AIDS prior to ART initiation in primary healthcare facilities in Gauteng, South Africa. PLOS ONE, 14(2), e0210622. https://doi.org/10.1371/journal.pone.0210622

Price, J., Willcox, M., Kabudula, C. W., Herbst, K., Kahn, K., & Harnden, A. (2019). Home deaths of children under 5 years in rural South Africa: a population‐based longitudinal study. Tropical Medicine & International Health, tmi.13239. https://doi.org/10.1111/tmi.13239
Ramjee, G., Sartorius, B., Morris, N., Wand, H., Reddy, T., Yssel, J. D., & Tanser, F. (2019). A decade of sustained geographic spread of HIV infections among women in Durban, South Africa. BMC Infectious Diseases, 19(1), 500. https://doi.org/10.1186/s12879-019-4080-6

Reid, D., Shenoi, S., Singh, R., Wang, M., Patel, V., Das, R., … Bucala, R. (2019). Low Expression Macrophage Migration Inhibitory Factor (MIF) alleles and Tuberculosis in HIV infected South Africans. Cytokine: X, 100004. https://doi.org/10.1016/j.cytox.2019.100004

Rochat, T. J., Houle, B., Stein, A., Mitchell, J., & Bland, R. M. (2019). Maternal alcohol use and children’s emotional and cognitive outcomes in rural South Africa. Samj South African Medical Journal, 109(7), 526–534. https://doi.org/10.7196/SAMJ.2019.v109i6.13120 
Rohr, J. K., Manne-Goehler, J., Gómez-Olivé, F. X., Wagner, R. G., Rosenberg, M., Geldsetzer, P., … Salomon, J. A. (2019). HIV treatment cascade for older adults in rural South Africa. Sexually Transmitted Infections, sextrans-2018-053925. https://doi.org/10.1136/sextrans-2018-053925  

Roider, J., Ngoepe, A., Muenchhoff, M., Adland, E., Groll, A., Ndung’u, T., … Leslie, A. (2019). Increased Regulatory T-Cell Activity and Enhanced T-Cell Homeostatic Signaling in Slow Progressing HIV-infected Children. Frontiers in Immunology, 10. https://doi.org/10.3389/fimmu.2019.00213

Roider, J., Porterfield, J. Z., Ogongo, P., Muenchhoff, M., Adland, E., Groll, A., … Leslie, A. (2019). Plasma IL-5 but Not CXCL13 Correlates With Neutralization Breadth in HIV-Infected Children. Frontiers in Immunology, 10, 1497. https://doi.org/10.3389/fimmu.2019.01497

Rolland, M., McGrath, N., Tiendrebeogo, T., Larmarange, J., Pillay, D., Dabis, F., & Orne-Gliemann, J. (2019). No effect of test and treat on sexual behaviours at population level in rural South Africa: AIDS, 1. https://doi.org/10.1097/QAD.0000000000002104

Rossenkhan, R., Rolland, M., Labuschagne, J. P. L., Ferreira, R.-C., Magaret, C. A., Carpp, L. N., … Edlefsen, P. T. (2019). Combining Viral Genetics and Statistical Modeling to Improve HIV-1 Time-of-Infection Estimation towards Enhanced Vaccine Efficacy Assessment. Viruses-Basel, 11(7), 607. https://doi.org/10.3390/v11070607

Sié, A., Coulibaly, B., Adama, S., Ouermi, L., Dah, C., Tapsoba, C., … Oldenburg, C. E. (2019). Antibiotic Prescription Patterns among Children Younger than 5 Years in Nouna District, Burkina Faso. The American Journal of Tropical Medicine and Hygiene. https://doi.org/10.4269/ajtmh.18-0791

 

Siedner, M. J., Bwana, M. B., Asiimwe, S., Amanyire, G., Musinguzi, N., Castillo-Mancilla, J., … Wyatt, M. (2019). Timing of Antiretroviral Therapy and Systemic Inflammation in Sub-Saharan Africa: Results From the META Longitudinal Cohort Study. The Journal of Infectious Diseases, jiz259. https://doi.org/10.1093/infdis/jiz259
Siedner, M. J., Bwana, M. B., Asiimwe, S., Musinguzi, N., Castillo-Mancilla, J., Amanyire, G., … On behalf of the META Study Investigators. (2019). Inflammatory biomarkers prior to antiretroviral therapy as prognostic markers of 12-month mortality in South Africa and Uganda. AIDS, Publish Ahead of Print. Retrieved from https://journals.lww.com/aidsonline/Fulltext/publishahead/Inflammatory_biomarkers_prior_to_antiretroviral.96890.aspx  
Ssekubugu, R., Renju, J., Zaba, B., Seeley, J., Bukenya, D., Ddaaki, W., … Wringe, A. (2019). “He was no longer listening to me”: A qualitative study in six Sub-Saharan African countries exploring next-of-kin perspectives on caring following the death of a relative from AIDS. AIDS Care, 31(6), 754–760. https://doi.org/10.1080/09540121.2018.1537467
Tomita, A., Smith, C. M., Lessells, R. J., Pym, A., Grant, A. D., de Oliveira, T., & Tanser, F. (2019). Space-time clustering of recently-diagnosed tuberculosis and impact of ART scale-up: Evidence from an HIV hyper-endemic rural South African population. Scientific Reports, 9(1), 10724. https://doi.org/10.1038/s41598-019-46455-7
Tomita, A., Vandormael, A., Bärnighausen, T., Phillips, A., Pillay, D., De Oliveira, T., & Tanser, F. (2019). Socio-behavioural and community predictors of unsuppressed viral load: multi-level results from a hyper-endemic rural South African population. AIDS, 1. https://doi.org/10.1097/QAD.0000000000002100  

Vandormael, A., Tanser, F., Cuadros, D., & Dobra, A. (2019). Estimating trends in the incidence rate with interval censored data and time-dependent covariates. Statistical Methods in Medical Research, 096228021982989. https://doi.org/10.1177/0962280219829892

Witham, M. D., Davies, J. I., Bärnighausen, T., Bountogo, M., Manne-Goehler, J., Payne, C. F., … Harling, G. (2019). Frailty and physical performance in the context of extreme poverty: A population-based study of older adults in rural Burkina Faso. Wellcome Open Research, 4, 135. https://doi.org/10.12688/wellcomeopenres.15455.1
Wong, E. B., Gold, M. C., Meermeier, E. W., Xulu, B. Z., Khuzwayo, S., Sullivan, Z. A., … Lewinsohn, D. M. (2019). TRAV1-2+ CD8+ T-cells including oligoconal expansions of MAIT cells are enriched in the airways in human tuberculosis. Communications Biology, 2(1), 203. https://doi.org/10.1038/s42003-019-0442-2

Wood, C. S., Thomas, M. R., Budd, J., Mashamba-Thompson, T. P., Herbst, K., Pillay, D., … Stevens, M. M. (2019). Taking connected mobile-health diagnostics of infectious diseases to the field. Nature, 566(7745), 467–474. https://doi.org/10.1038/s41586-019-0956-2

Zhang, Y., Bärnighausen, T., & Eyal, N. (2019). Appropriate Health Resource Rationing in a Non-Ideal World: JAIDS Journal of Acquired Immune Deficiency Syndromes, 1. https://doi.org/10.1097/QAI.0000000000002127

Zhang, Y., Bärnighausen, T., & Eyal, N. (2019). When Global ART Budgets Cannot Cover All Patients, Who Should Be Eligible?: JAIDS Journal of Acquired Immune Deficiency Syndromes, 1. https://doi.org/10.1097/QAI.0000000000002017

2018 Publications

Ahmed, S., Autrey, J., Katz, I. T., Fox, M. P., Rosen, S., Onoya, D., … Bor, J. (2018). Why do people living with HIV not initiate treatment? A systematic review of qualitative evidence from low- and middle-income countries. Social Science & Medicine. https://doi.org/10.1016/j.socscimed.2018.05.048

Attaf, M., Malik, A., Severinsen, M.C., Roider, J., Ogongo, P., Buus, S., Ndung’u, T., Leslie, A., Kløverpris, H.N., Matthews, P.C., Sewell, A.K., Goulder, P. (2018). Major TCR Repertoire Perturbation by Immunodominant HLA-B*44:03-Restricted CMV-Specific T Cells. Frontiers in Immunology, 9. https://doi.org/10.3389/fimmu.2018.02539

Baisley, K., Chimbindi, N., Mthiyane, N., Floyd, S., McGrath, N., Pillay, D., … Shahmanesh, M. (2018). High HIV incidence and low uptake of HIV prevention services: The context of risk for young male adults prior to DREAMS in rural KwaZulu-Natal, South Africa. PLOS ONE, 13(12), e0208689. https://doi.org/10.1371/journal.pone.0208689

Baiyegunhi, O., Ndlovu, B., Ogunshola, F., Ismail, N., Walker, B. D., Ndung’u, T., & Ndhlovu, Z. M. (2018). Frequencies of circulating Th1-biased T follicular helper cells in acute HIV-1 infection correlate with the development of HIV-specific antibody responses and lower set point viral load. Journal of Virology, JVI.00659-18. https://doi.org/10.1128/JVI.00659-18

Barichievy, S., Naidoo, J., Boulle, M., Scholefield, J., Parihar, S. P., Coussens, A. K., … Mhlanga, M. M. (2017). Viral apoptosis evasion via the MAPK pathway by use of a host long noncoding RNA. https://doi.org/10.1101/153130

Beteck, R. M., Seldon, R., Coertzen, D., van der Watt, M. E., Reader, J., Mackenzie, J. S., … Haynes, R. K. (2018). Accessible and distinct decoquinate derivatives active against Mycobacterium tuberculosis and apicomplexan parasites. Communications Chemistry, 1(1). https://doi.org/10.1038/s42004-018-0062-7 

Birdthistle, I., Schaffnit, S. B., Kwaro, D., Shahmanesh, M., Ziraba, A., Kabiru, C. W., … Floyd, S. (2018). Evaluating the impact of the DREAMS partnership to reduce HIV incidence among adolescent girls and young women in four settings: a study protocol. BMC Public Health, 18(1).https://doi.org/10.1186/s12889-018-5789-7 https://doi.org/10.1186/s12889-018-5789-7

Bommer, C., Sagalova, V., Heesemann, E., Manne-Goehler, J., Atun, R., Bärnighausen, T., … Vollmer, S. (2018). Global Economic Burden of Diabetes in Adults: Projections From 2015 to 2030. Diabetes Care, dc171962. https://doi.org/10.2337/dc17-1962

Bond, V., Ngwenya, F., Murray, E., Ngwenya, N., Viljoen, L., Gumede, D., … Seeley, J. (2018). Value and Limitations of Broad Brush Surveys Used in Community-Randomized Trials in Southern Africa. Qualitative Health Research, 1049732318809940. https://doi.org/10.1177/1049732318809940

Brennan, A. T., Bor, J., Davies, M.-A., Wandeler, G., Prozesky, H., Fatti, G., … Fox, M. P. (2018). Drug Side Effects and Retention on HIV Treatment: a Regression Discontinuity Study of Tenofovir Implementation in South Africa and Zambia. American Journal of Epidemiology. https://doi.org/10.1093/aje/kwy093

Camlin, C. S., Cassels, S., & Seeley, J. (2018). Bringing population mobility into focus to achieve HIV prevention goals. Journal of the International AIDS Society, 21(S4), e25136. https://doi.org/10.1002/jia2.25136

Chang, A. Y., Haber, N., Bärnighausen, T., Herbst, K., Gareta, D., Pillay, D., & Salomon, J. A. (2018). Improving the validity of mathematical models for HIV elimination by incorporating empirical estimates of progression through the HIV treatment cascade: JAIDS Journal of Acquired Immune Deficiency Syndromes, https://doi.org/10.1097/QAI.0000000000001852

Chang, S. T., Chihota, V. N., Fielding, K. L., Grant, A. D., Houben, R. M., White, R. G., … Wagner, B. G. (2018). Small contribution of gold mines to the ongoing tuberculosis epidemic in South Africa: a modeling-based study. BMC Medicine, 16(1). https://doi.org/10.1186/s12913-018-3404-3

Chetty, T., Yapa, H. M. N., Herbst, C., Geldsetzer, P., Naidu, K. K., … Bärnighausen, T. (2018). The MONARCH intervention to enhance the quality of antenatal and postnatal primary health services in rural South Africa: protocol for a stepped-wedge cluster-randomised controlled trial. BMC Health Services Research, 18(1). https://doi.org/10.1186/s12913-018-3404-3

Chimbindi, N., Birdthistle, I., Shahmanesh, M., Osindo, J., Mushati, P., Ondeng’e, K., … Seeley, J. (2018). Translating DREAMS into practice: Early lessons from implementation in six settings. PLOS ONE, 13(12), e0208243. https://doi.org/10.1371/journal.pone.0208243

Chimbindi, N., Mthiyane, N., Birdthistle, I., Floyd, S., McGrath, N., Pillay, D., … Shahmanesh, M. (2018). Persistently high incidence of HIV and poor service uptake in adolescent girls and young women in rural KwaZulu-Natal, South Africa prior to DREAMS. PLOS ONE, 13(10), e0203193. https://doi.org/10.1371/journal.pone.0203193

Chimukangara, B., Kharsany, A. B., Lessells, R. J., Naidoo, K., Rhee, S.-Y., Manasa, J., ….Pillay, D, de Oliveira, T. (2018). Moderate to high levels of pre-treatment HIV drug resistance in KwaZulu-Natal Province, South Africa. AIDS Research and Human Retroviruses. https://doi.org/10.1089/AID.2018.0202

Chinta, K. C., Rahman, M. A., Saini, V., Glasgow, J. N., Reddy, V. P., Lever, J. M., … Steyn, A. J. C. (2018). Microanatomic Distribution of Myeloid Heme Oxygenase-1 Protects against Free Radical-Mediated Immunopathology in Human Tuberculosis. Cell Reports, 25(7), 1938-1952.e5. https://doi.org/10.1016/j.celrep.2018.10.073

Chung, A., Makuba, J. M., Ndlovu, B., Licht, A., Robinson, H., Ramlakhan, Y., … Alter, G. (2018). Viral control in chronic HIV-1 subtype C infection is associated with enrichment of p24 IgG1 with Fc effector activity: AIDS, 1. https://doi.org/10.1097/QAD.0000000000001812

Collier, D., Haddow, L., Brijkumar, J., Moosa, M.-Y., Benjamin, L., & Gupta, R. (2018). HIV Cerebrospinal Fluid Escape and Neurocognitive Pathology in the Era of Combined Antiretroviral Therapy: What Lies Beneath the Tip of the Iceberg in Sub-Saharan Africa? Brain Sciences, 8(10), 190. https://doi.org/10.3390/brainsci8100190

Coltart, C. E. M., Hoppe, A., Parker, M., Dawson, L., Amon, J. J., Simwinga, M., … Zimmerman, R. (2018). Ethical considerations in global HIV phylogenetic research. The Lancet HIV. https://doi.org/10.1016/S2352-3018(18)30134-6

Cuadros, D. F., Sartorius, B., Hall, C., Akullian, A., Bärnighausen, T., & Tanser, F. (2018). Capturing the spatial variability of HIV epidemics in South Africa and Tanzania using routine healthcare facility data. International Journal of Health Geographics, 17(1). https://doi.org/10.1186/s12942-018-0146-8

Cumming, B. M., Addicott, K. W., Adamson, J. H., & Steyn, A. J. (2018). Mycobacterium tuberculosis induces decelerated bioenergetic metabolism in human macrophages. ELife, 7. https://doi.org/10.7554/eLife.39169

De Neve, J.-W., Karlsson, O., Coetzee, L., Schröder, H., Subramanian, S., Bärnighausen, T., & Vollmer, S. (2018). Antiretroviral therapy coverage associated with increased co-residence between elderly people and prime-age adults in Africa: AIDS, 1. https://doi.org/10.1097/QAD.0000000000001917

Deiner, M. S., Keenan, J. D., Diarra, A., Sié, A., Zongo, A., Millogo, O., … Chodosh, J. (2018). Seasonal and Temporal Trends in Childhood Conjunctivitis in Burkina Faso. The American Journal of Tropical Medicine and Hygiene. https://doi.org/10.4269/ajtmh.17-0642

Derache, A., Iwuji, C. C., Baisley, K., Danaviah, S., Marcelin, A.-G., Calvez, V., … Pillay, D. (2018). Impact of next generation sequencing defined HIV pre-treatment drug resistance on virological outcomes in the ANRS 12249 treatment as prevention trial. Clinical Infectious Diseases. https://doi.org/10.1093/cid/ciy881

Derache, A., Iwuji, C.C., Danaviah, S., Giandhari, J., Marcelin, A.-G., Calvez, V., de Oliveira, T., Dabis, F., Pillay, D., Gupta, R.K. (2018). Predicted antiviral activity of tenofovir versus abacavir in combination with a cytosine analogue and the integrase inhibitor dolutegravir in HIV-1-infected South African patients initiating or failing first-line ART. Journal of Antimicrobial Chemotherapy. https://doi.org/10.1093/jac/dky428

Dong, K. L., Moodley, A., Kwon, D. S., Ghebremichael, M. S., Dong, M., Ismail, N., … Ndung’u, T. (2018). Detection and treatment of Fiebig stage I HIV-1 infection in young at-risk women in South Africa: a prospective cohort study. The Lancet HIV, 5(1), e35–e44. https://doi.org/10.1016/S2352-3018(17)30146-7

Doyle, A. M., Floyd, S., Baisley, K., Orindi, B., Kwaro, D., Mthiyane, T. N., … Birdthistle, I. (2018). Who are the male sexual partners of adolescent girls and young women? Comparative analysis of population data in three settings prior to DREAMS roll-out. PLOS ONE, 13(9), e0198783. https://doi.org/10.1371/journal.pone.0198783

Dzomba, A., Govender, K., Mashamba-Thompson, T. P., & Tanser, F. (2018). Mobility and increased risk of HIV acquisition in South Africa: a mixed-method systematic review protocol. Systematic Reviews, 7(1). https://doi.org/10.1186/s13643-018-0703-z

Ekoru, K., Young, E. H., Dillon, D. G., Gurdasani, D., Stehouwer, N., Faurholt-Jepsen, D., … Sandhu, M. S. (2018). HIV treatment is associated with a twofold higher probability of raised triglycerides: pooled analyses in 21 023 individuals in sub-Saharan Africa. Global Health, Epidemiology and Genomics, 3. https://doi.org/10.1017/gheg.2018.7

Foo, C. S., Lupien, A., Kienle, M., Vocat, A., Benjak, A., Sommer, R., … Cole, S. T. (2018). Arylvinylpiperazine Amides, a New Class of Potent Inhibitors Targeting QcrB of Mycobacterium tuberculosis. MBio, 9(5). https://doi.org/10.1128/mBio.01276-18

Francis, S. C., Mthiyane, T. N., Baisley, K., Mchunu, S. L., Ferguson, J. B., Smit, T., … Shahmanesh, M. (2018). Prevalence of sexually transmitted infections among young people in South Africa: A nested survey in a health and demographic surveillance site. PLOS Medicine15(2), e1002512. https://doi.org/10.1371/journal.pmed.1002512

Frank, D. J., Horne, D. J., Dutta, N. K., Shaku, M. T., Madensein, R., Hawn, T. R., … Tanvir, Z. (2018). Remembering the Host in Tuberculosis Drug Development. The Journal of Infectious Diseases. https://doi.org/10.1093/infdis/jiy712

Geldsetzer, P., Francis, J. M., Sando, D., Asmus, G., Lema, I. A., Mboggo, E., … Bärnighausen, T. (2018). Community delivery of antiretroviral drugs: A non-inferiority cluster-randomized pragmatic trial in Dar es Salaam, Tanzania. PLOS Medicine, 15(9), e1002659. https://doi.org/10.1371/journal.pmed.1002659

Geldsetzer, P., Manne-Goehler, J., Theilmann, M., Davies, J. I., Awasthi, A., Vollmer, S., … Atun, R. (2018). Diabetes and Hypertension in India: A Nationally Representative Study of 1.3 Million Adults. JAMA Internal Medicine. https://doi.org/10.1001/jamainternmed.2017.8094

Geldsetzer, P., Manne-Goehler, J., Theilmann, M., Davies, J. I., Awasthi, A., Danaei, G., … Atun, R. (2018). Geographic and sociodemographic variation of cardiovascular disease risk in India: A cross-sectional study of 797,540 adults. PLOS Medicine, 15(6), e1002581. https://doi.org/10.1371/journal.pmed.1002581

Geldsetzer, P., Vaikath, M., Wagner, R., Rohr, J. K., Montana, L., Gómez-Olivé, F. X., … Berkman, L. F. (2018). Depressive Symptoms and their Relation to Age and Chronic diseases among middle-aged and Older Adults in rural South Africa. The Journals of Gerontology: Series A. https://doi.org/10.1093/gerona/gly145

Ginsburg, C., Bocquier, P., Béguy, D., Afolabi, S., Kahn, K., Obor, D., … Collinson, M. A. (2018). Association between internal migration and epidemic dynamics: an analysis of cause-specific mortality in Kenya and South Africa using health and demographic surveillance data. BMC Public Health, 18(1). https://doi.org/10.1186/s12889-018-5851-5

Günthard, H. F., Calvez, V., Paredes, R., Pillay, D., Shafer, R. W., Wensing, A. M., … Richman, D. D. (2018). Human Immunodeficiency Virus Drug Resistance: 2018 Recommendations of the International Antiviral Society–USA Panel. Clinical Infectious Diseases. https://doi.org/10.1093/cid/ciy463

Haber, N., Harling, G., Cohen, J., Mutevedzi, T., Tanser, F., Gareta, D., … Fink, G. (2018). List randomization for eliciting HIV status and sexual behaviors in rural KwaZulu-Natal, South Africa: a randomized experiment using known true values for validation. BMC Medical Research Methodology, 18(1). https://doi.org/10.1186/s12874-018-0507-9

Harling, G., Gumede, D., Shahmanesh, M., Pillay, D., Bärnighausen, T. W., & Tanser, F. (2018). Sources of social support and sexual behaviour advice for young adults in rural South Africa. BMJ Global Health, 3(6), e000955. https://doi.org/10.1136/bmjgh-2018-000955

Hontelez, J. A. C., Bor, J., Tanser, F. C., Pillay, D., Moshabela, M., & Bärnighausen, T. (2018). HIV Treatment Substantially Decreases Hospitalization Rates: Evidence From Rural South Africa. Health Affairs, 37(6), 997–1004. https://doi.org/10.1377/hlthaff.2017.0820

Hu, J., Geldsetzer, P., Steele, S. J., Matthews, P., Ortblad, K., Solomon, T., … Bärnighausen, T. (2018). The impact of lay counselors on HIV testing rates: Quasi-experimental evidence from lay counselor redeployment in KwaZulu-Natal, South Africa. AIDS, 1. https://doi.org/10.1097/QAD.0000000000001924

Iwuji, C., McGrath, N., Calmy, A., Dabis, F., Pillay, D., Newell, M.-L., … Porter, K. (2018). Universal test and treat is not associated with sub-optimal antiretroviral therapy adherence in rural South Africa: the ANRS 12249 TasP trial. Journal of the International AIDS Society, 21(6), e25112. https://doi.org/10.1002/jia2.25112

Kaida, A., Dietrich, J. J., Laher, F., Beksinska, M., Jaggernath, M., Bardsley, M., … Gray, G. (2018). A high burden of asymptomatic genital tract infections undermines the syndromic management approach among adolescents and young adults in South Africa: implications for HIV prevention efforts. BMC Infectious Diseases, 18(1). https://doi.org/10.1186/s12879-018-3380-6

Karat, A. S., Maraba, N., Tlali, M., Charalambous, S., Chihota, V. N., Churchyard, G. J., … Grant, A. D. (2018). Performance of verbal autopsy methods in estimating HIV-associated mortality among adults in South Africa. BMJ Global Health, 3(4), e000833. https://doi.org/10.1136/bmjgh-2018-000833

Kim, J. T., Chang, E., Sigal, A., & Baltimore, D. (2018). Dendritic cells efficiently transmit HIV to T Cells in a tenofovir and raltegravir insensitive manner. PLOS ONE, 13(1), e0189945. https://doi.org/10.1371/journal.pone.0189945

Kluberg, S. A., Fox, M. P., LaValley, M., Pillay, D., Bärnighausen, T., & Bor, J. (2018). Do ART eligibility expansions crowd out the sickest? Evidence from rural South Africa. Tropical Medicine & International Health. https://doi.org/10.1111/tmi.13122

Kufa, T., Fielding, K. L., Hippner, P., Kielmann, K., Vassall, A., Churchyard, G. J., … Charalambous, S. (2018). An intervention to optimise the delivery of integrated tuberculosis and HIV services at primary care clinics: results of the MERGE cluster randomised trial. Contemporary Clinical Trials, 72, 43–52. https://doi.org/10.1016/j.cct.2018.07.013

Larmarange, J., Diallo, M. H., McGrath, N., Iwuji, C., Plazy, M., Thiébaut, R., … the ANRS 12249 TasP Study Group. (2018). The impact of population dynamics on the population HIV care cascade: results from the ANRS 12249 Treatment as Prevention trial in rural KwaZulu-Natal (South Africa). Journal of the International AIDS Society, 21, e25128. https://doi.org/10.1002/jia2.25128

Liu, Y., Ndumnego, O., Chen, T., Kim, R., Jenny-Avital, E., Ndung’u, T., … Achkar, J. (2018). Soluble CD14 as a Diagnostic Biomarker for Smear-Negative HIV-Associated Tuberculosis. Pathogens, 7(1), 26. https://doi.org/10.3390/pathogens7010026

Lozano, R., Fullman, N., Abate, D., Abay, S. M., Abbafati, C., Abbasi, N., …Tanser, F., Bärnighausen T…. Murray, C. J. L. (2018). Measuring progress from 1990 to 2017 and projecting attainment to 2030 of the health-related Sustainable Development Goals for 195 countries and territories: a systematic analysis for the Global Burden of Disease Study 2017. The Lancet, 392(10159), 2091–2138. https://doi.org/10.1016/S0140-6736(18)32281-5

Manne-Goehler, J., Rohr, J., Montana, L., Siedner, M., Harling, G., Gómez-Olivé, F. X., … Bärnighausen, T. W. (2018). ART Denial: Results of a Home-Based Study to Validate Self-reported Antiretroviral Use in Rural South Africa. AIDS and Behavior. https://doi.org/10.1007/s10461-018-2351-7

Maraba, N., Chihota, V., McCarthy, K., Churchyard, G. J., & Grant, A. D. (2018). Linkage to care among adults being investigated for tuberculosis in South Africa: pilot study of a case manager intervention. BMJ Open, 8(5), e021111. https://doi.org/10.1136/bmjopen-2017-021111

McCarthy, K., Fielding, K., Churchyard, G. J., & Grant, A. D. (2018). Empiric tuberculosis treatment in South African primary health care facilities - for whom, where, when and why: Implications for the development of tuberculosis diagnostic tests. PLOS ONE, 13(1), e0191608. https://doi.org/10.1371/journal.pone.0191608

McGovern, M., Canning, D., & Bärnighausen, T. (2018). Accounting for non-response bias using participation incentives and survey design: An application using gift vouchers. Economics Letters. https://doi.org/10.1016/j.econlet.2018.07.040

Meyer-Rath, G., McGillen, J. B., Cuadros, D. F., Hallett, T. B., Bhatt, S., Wabiri, N., … Rehle, T. (2018). Targeting the right interventions to the right people and places: the role of geospatial analysis in HIV programme planning. AIDS, 1. https://doi.org/10.1097/QAD.0000000000001792

Moazen, B., Saeedi Moghaddam, S., Silbernagl, M. A., Lotfizadeh, M., Bosworth, R. J., Alammehrjerdi, Z., … Dolan, K. A. (2018). Prevalence of Drug Injection, Sexual Activity, Tattooing, and Piercing Among Prison Inmates. Epidemiologic Reviews, mxy002–mxy002. https://doi.org/10.1093/epirev/mxy002

Mori, M., Leitman, E., Walker, B., Ndung’u, T., Carrington, M., & Goulder, P. (2018). Impact of HLA allele-KIR pairs on HIV clinical outcome in South Africa. The Journal of Infectious Diseases. https://doi.org/10.1093/infdis/jiy692

Mukora, R., Tlali, M., Monkwe, S., Charalambous, S., Karat, A. S., Fielding, K. L., … Vassall, A. (2018). Cost of point-of-care lateral flow urine lipoarabinomannan antigen testing in HIV-positive adults in South Africa. The International Journal of Tuberculosis and Lung Disease, 22(9), 1082–1087. https://doi.org/10.5588/ijtld.18.0046

Naidoo, N., Pillay, B., Bubb, M., Pym, A., Chiliza, T., Naidoo, K., … Pillay, M. (2018). Evaluation of a synthetic peptide for the detection of anti- Mycobacterium tuberculosis curli pili IgG antibodies in patients with pulmonary tuberculosis. Tuberculosis, 109, 80–84. https://doi.org/10.1016/j.tube.2018.01.007

Ndung’u, T., Dong, K. L., Kwon, D. S., & Walker, B. D. (2018). A FRESH approach: Combining basic science and social good. Science Immunology, 3(27), eaau2798. https://doi.org/10.1126/sciimmunol.aau2798

Ngwenya, N., Gumede, D., Shahmanesh, M., McGrath, N., Grant, A., & Seeley, J. (2018). Community perceptions of the socio-economic structural context influencing HIV and TB risk, prevention and treatment in a high prevalence area in the era of antiretroviral therapy. African Journal of AIDS Research, 17(1), 72–81. https://doi.org/10.2989/16085906.2017.1415214

Ogunshola, F., Anmole, G., Miller, R. L., Goering, E., Nkosi, T., Muema, D., … Ndhlovu, Z. M. (2018). Dual HLA B*42 and B*81-reactive T cell receptors recognize more diverse HIV-1 Gag escape variants. Nature Communications, 9(1). https://doi.org/10.1038/s41467-018-07209-7

Ojwach, D. B. A., MacMillan, D., Reddy, T., Novitsky, V., Brumme, Z. L., Brockman, M. A., … Mann, J. K. (2018). Pol-driven replicative capacity impacts disease progression in HIV-1 subtype C infection. Journal of Virology, JVI.00811-18. https://doi.org/10.1128/JVI.00811-18

Oldenburg, C. E., Bor, J., Harling, G., Tanser, F., Mutevedzi, T., Shahmanesh, M., … Bärnighausen, T. (2018). Impact of early antiretroviral therapy eligibility on HIV acquisition: Household-level evidence from rural South Africa. AIDS, 1. https://doi.org/10.1097/QAD.0000000000001737

Oldenburg, C. E., Ortblad, K. F., Chanda, M. M., Mwale, M., Chongo, S., Kanchele, C., … Bärnighausen, T. (2018). Intimate Partner Violence and Antiretroviral Therapy Initiation Among Female Sex Workers Newly Diagnosed with HIV in Zambia: A Prospective Study. JAIDS Journal of Acquired Immune Deficiency Syndromes, 1. https://www.ncbi.nlm.nih.gov/pubmed/30142141

Oldenburg, C., Chanda, M. M., Ortblad, K. F., Mwale, M., Chongo, S., Kamungoma, N., … Bärnighausen, T. (2018). Effect of HIV self-testing on the number of sexual partners among female sex workers in Zambia: A randomized controlled trial. AIDS, 1. https://doi.org/10.1097/QAD.0000000000001740

Ortblad, K. F., Bärnighausen, T., Chimbindi, N., Masters, S. H., Salomon, J. A., & Harling, G. (2018). Predictors of male circumcision incidence in a traditionally non-circumcising South African population-based cohort. PLOS ONE, 13(12), e0209172. https://doi.org/10.1371/journal.pone.0209172

Ortblad, K. F., Chanda, M. M., Musoke, D. K., Ngabirano, T., Mwale, M., Nakitende, A., … Oldenburg, C. E. (2018). Acceptability of HIV self-testing to support pre-exposure prophylaxis among female sex workers in Uganda and Zambia: results from two randomized controlled trials. BMC Infectious Diseases, 18(1). https://doi.org/10.1186/s12879-018-3415-z

Pacl, H. T., Reddy, V. P., Saini, V., Chinta, K. C., & Steyn, A. J. (2018). Host-pathogen redox dynamics modulate Mycobacterium tuberculosis pathogenesis. Pathogens and Disease. https://doi.org/10.1093/femspd/fty036

Patten, G., Schomaker, M., Davies, M.-A., Rabie, H., van Zyl, G., Technau, K., … Fairlie, L. (2018). What Should we do When HIV-Positive Children Fail First-Line Combination Antiretroviral Therapy? A Comparison of 4 ART Management Strategies: The Pediatric Infectious Disease Journal, 1. https://doi.org/10.1097/INF.0000000000002156

Perriat, D., Balzer, L., Hayes, R., Lockman, S., Walsh, F., Ayles, H., … the Universal Test and Treat Trials Consortium (UT3C). (2018). Comparative assessment of five trials of universal HIV testing and treatment in sub-Saharan Africa. Journal of the International AIDS Society, 21(1), e25048. https://doi.org/10.1002/jia2.25048

Perriat, D., Plazy, M., Gumede, D., Boyer, S., Pillay, D., Dabis, F., Seeley,J., Orne-Gliemann, J.; ANRS 12249 TasP Study Group.… for the ANRS 12249 TasP Study Group. (2018). “If you are here at the clinic, you do not know how many people need help in the community”: Perspectives of home-based HIV services from health care workers in rural KwaZulu-Natal, South Africa in the era of universal test-and-treat. PLOS ONE, 13(11), e0202473. https://doi.org/10.1371/journal.pone.0202473

Phillips, A. N., Venter, F., Havlir, D., Pozniak, A., Kuritzkes, D., Wensing, A., … Calmy, A. (2018). Risks and benefits of dolutegravir-based antiretroviral drug regimens in sub-Saharan Africa: a modelling study. The Lancet HIV, 6(2), e116–e127. https://doi.org/10.1016/S2352-3018(18)30317-5

Pillay, K., Gardner, M., Gould, A., Otiti, S., Mullineux, J., Bärnighausen, T., & Matthews, P. M. (2018). Long term effect of primary health care training on HIV testing: A quasi-experimental evaluation of the Sexual Health in Practice (SHIP) intervention. PLOS ONE, 13(8), e0199891. https://doi.org/10.1371/journal.pone.0199891

Poole, D. N., Hedt-Gauthier, B., Liao, S., Raymond, N. A., & Bärnighausen, T. (2018). Major depressive disorder prevalence and risk factors among Syrian asylum seekers in Greece. BMC Public Health, 18(1). https://doi.org/10.1186/s12889-018-5822-x

Ramsuran, V., Naranbhai, V., Horowitz, A., Qi, Y., Martin, M. P., Yuki, Y., … Carrington, M. (2018). Elevated HLA-A expression impairs HIV control through inhibition of NKG2A-expressing cells. Science, 359(6371), 86–90. https://doi.org/10.1126/science.aam8825

Ray, P. C., Bayliss, T., Prosser, G. A., Harrison, J. R., Green, K., Soares de Melo, C., … Boshoff, H. I. M. (2018). 2-Mercapto-quinazolinones as inhibitors of NDH-2 and Mycobacterium tuberculosis: Structure-activity relationships, mechanism of action and ADME characterization. ACS Infectious Diseases. https://doi.org/10.1021/acsinfecdis.7b00275

Reddy, V. P., Chinta, K. C., Saini, V., Glasgow, J. N., Hull, T. D., Traylor, A., … Steyn, A. J. C. (2018). Ferritin H Deficiency in Myeloid Compartments Dysregulates Host Energy Metabolism and Increases Susceptibility to Mycobacterium tuberculosis Infection. Frontiers in Immunology, 9. https://doi.org/10.3389/fimmu.2018.00860

Rickman, H. M., Miller, R. F., Morris-Jones, S., Kellgren, L., Edwards, S. G., & Grant, A. D. (2018). Missed opportunities for tuberculosis prevention among patients accessing a UK HIV service. International Journal of STD & AIDS, 095646241877301. https://doi.org/10.1177/0956462418773010

Roider, J., Maehara, T., Ngoepe, A., Ramsuran, D., Muenchhoff, M., Adland, E., … Leslie, A. (2018). High-Frequency, Functional HIV-Specific T-Follicular Helper and Regulatory Cells Are Present Within Germinal Centers in Children but Not Adults. Frontiers in Immunology, 9. https://doi.org/10.3389/fimmu.2018.01975 

Rosenberg, M. S., Gómez-Olivé, F. X., Rohr, J. K., Kahn, K., & Bärnighausen, T. W. (2018). Are circumcised men safer sex partners? Findings from the HAALSI cohort in rural South Africa. PLOS ONE, 13(8), e0201445. https://doi.org/10.1371/journal.pone.0201445

Seipone, I. D., Singh, R., Patel, V. B., Singh, A., Gordon, M. L., Muema, D. M., … Ndung’u, T. (2018). Tuberculous meningitis is associated with higher cerebrospinal HIV-1 viral loads compared to other HIV-1-associated meningitides. PLOS ONE, 13(2), e0192060. https://doi.org/10.1371/journal.pone.0192060

Sié, A., Porco, T. C., Dah, C., Lietman, T. M., Keenan, J. D., Ouermi, L., … Snyder, B. M. (2018). Effect of Antibiotics on Short-Term Growth among Children in Burkina Faso: A Randomized Trial. The American Journal of Tropical Medicine and Hygiene. https://doi.org/10.4269/ajtmh.18-0342

Siedner, M. J., & Triant, V. (2018). Undetectable = Untransmittable and Your Health: The personal benefits of early and continuous therapy for HIV infection. The Journal of Infectious Diseases. https://doi.org/10.1093/infdis/jiy445

Siedner, M. J., Baisley, K., Orne-Gliemann, J., Pillay, D., Koole, O., Wong, E. B., … Bachmann, M. (2018). Linkage to primary care after home-based blood pressure screening in rural KwaZulu-Natal, South Africa: a population-based cohort study. BMJ Open, 8(12), e023369. https://doi.org/10.1136/bmjopen-2018-023369

Smith, C. M., Lessells, R., Grant, A. D., Herbst, K., & Tanser, F. (2018). Spatial clustering of drug-resistant tuberculosis in Hlabisa subdistrict, KwaZulu-Natal, 2011–2015. The International Journal of Tuberculosis and Lung Disease22(3), 287–293. https://doi.org/10.5588/ijtld.17.0457

Sweeney, S., Mukora, R., Candfield, S., Guinness, L., Grant, A. D., & Vassall, A. (2018). Measuring income for catastrophic cost estimates: Limitations and policy implications of current approaches. Social Science & Medicine, 215, 7–15. https://doi.org/10.1016/j.socscimed.2018.08.041

Tanser, F., Azongo, D. K., Vandormael, A., Bärnighausen, T., & Appleton, C. (2018). Impact of the scale-up of piped water on urogenital schistosomiasis infection in rural South Africa. ELife, 7, e33065. https://doi.org/10.7554/eLife.33065

Tlou, B., Sartorius, B., & Tanser, F. (2018). Investigating risk factors for under-five mortality in an HIV hyper-endemic area of rural South Africa, from 2000-2014. PLOS ONE, 13(11), e0207294. https://doi.org/10.1371/journal.pone.0207294

Tlou, B., Sartorius, B., Tanser, F., 2018. Effect of timing of mother’s death on child survival in a rural HIV hyper-endemic South African population. BMC Public Health,18.  https://doi.org/10.1186/s12889-018-6152-8

van der Heijden, Y. F., Karim, F., Chinappa, T., Mufamadi, G., Zako, L., Shepherd, B. E., … Pym, A. S. (2018). Older age at first tuberculosis diagnosis is associated with tuberculosis recurrence in HIV-negative persons. The International Journal of Tuberculosis and Lung Disease, 22(8), 871–877. https://doi.org/10.5588/ijtld.17.0766

Walker-Sperling, V., Ramsuran, V., Martin, M., Naranbhai, V., Li, H., Anderson, S. K., … Carrington, M. (2018). P069UTR SNPS rs111686073 and rs73410010 independently modify expression of tapasin in blacks. Human Immunology, 79, 113. https://doi.org/10.1016/j.humimm.2018.07.128

Wang, Z., Cumming, B. M., Mao, C., Zhu, Y., Lu, P., Steyn, A. J. C., … Hu, Y. (2018). RbpA and σ B association regulates polyphosphate levels to modulate mycobacterial isoniazid-tolerance: RbpA and σ B associate to regulate INH-tolerance. Molecular Microbiology. https://doi.org/10.1111/mmi.13952

Yoo, H., Lee, J., Yim, J.-J., Bärnighausen, T., Tanser, F., & Park, S. K. (2018). Effect of the Number of Pregnancies on Mortality Risk in HIV-Infected Women: a Prospective Cohort Study in Rural KwaZulu-Natal, South Africa. AIDS and Behavior. https://doi.org/10.1007/s10461-018-2232-0

Yoon, H. A., Nakouzi, A., Chang, C. C., Kuniholm, M. H., Carreño, L. J., Wang, T., … Pirofski, L. (2018). Association between plasma antibody responses and risk for Cryptococcus-associated immune reconstitution inflammatory syndrome. The Journal of Infectious Diseases. https://doi.org/10.1093/infdis/jiy447

2017 Publications

Aicken, C. R. H., Sutcliffe, L. J., Gibbs, J., Tickle, L. J., Hone, K., Harding-Esch, E. M., … Shahmanesh, M. (2017). Using the eSexual Health Clinic to access chlamydia treatment and care via the internet: a qualitative interview study. Sexually Transmitted Infections. https://doi.org/10.1136/sextrans-2017-053227

Aicken, C. R. H., Sutcliffe, L. J., Gibbs, J., Tickle, L. J., Hone, K., Harding-Esch, E. M., … Shahmanesh, M. (2017). Using the eSexual Health Clinic to access chlamydia treatment and care via the internet: a qualitative interview study. Sexually Transmitted Infections. https://doi.org/10.1136/sextrans-2017-053227

Akilimali, N. A., Chang, C. C., Muema, D. M., Reddy, T., Moosa, M.-Y. S., Lewin, S. R., … Ndung’u, T. (2017). Plasma But Not Cerebrospinal Fluid Interleukin 7 and Interleukin 5 Levels Pre–Antiretroviral Therapy Commencement Predict Cryptococcosis-Associated Immune Reconstitution Inflammatory Syndrome. Clinical Infectious Diseases, 65(9), 1551–1559. https://doi.org/10.1093/cid/cix598

Akilimali, N. A., Chang, C. C., Muema, D. M., Reddy, T., Moosa, M.-Y. S., Lewin, S. R., … Ndung’u, T. (2017). Plasma But Not Cerebrospinal Fluid Interleukin 7 and Interleukin 5 Levels Pre–Antiretroviral Therapy Commencement Predict Cryptococcosis-Associated Immune Reconstitution Inflammatory Syndrome. Clinical Infectious Diseases, 65(9), 1551–1559. https://doi.org/10.1093/cid/cix598

Akullian, A., Bershteyn, A., Klein, D., Vandormael, A., Bärnighausen, T., & Tanser, F. (2017). Sexual partnership age pairings and risk of HIV acquisition in rural South Africa: AIDS, 31(12), 1755–1764. https://doi.org/10.1097/QAD.0000000000001553

Akullian, A., Bershteyn, A., Klein, D., Vandormael, A., Bärnighausen, T., & Tanser, F. (2017). Sexual partnership age pairings and risk of HIV acquisition in rural South Africa: AIDS, 31(12), 1755–1764. https://doi.org/10.1097/QAD.0000000000001553

Ambia, J., Renju, J., Wringe, A., Todd, J., Geubbels, E., Nakiyingi-Miiro, J., … Mee, P. (2017). From policy to practice: Exploring the implementation of antiretroviral therapy access and retention policies between 2013 and 2016 in six sub-Saharan African countries. Bmc Health Services Research, 17, 758. https://doi.org/10.1186/s12913-017-2678-1
Baernighausen, T., Oldenburg, C., Tugwell, P., Bommer, C., Ebert, C., Barreto, M., … Vollmer, S. (2017). Quasi-experimental study designs series-paper 7: Assessing the assumptions. Journal of Clinical Epidemiology, 89, 53–66. https://doi.org/10.1016/j.jclinepi.2017.02.017
Baernighausen, T., Rottingen, J.-A., Rockers, P., Shemilt, I., & Tugwell, P. (2017). Quasi-experimental study designs series-paper 1: Introduction: Two historical lineages. Journal of Clinical Epidemiology, 89, 4–11. https://doi.org/10.1016/j.jclinepi.2017.02.020
Baernighausen, T., Tugwell, P., Rottingen, J.-A., Shemilt, I., Rockers, P., Geldsetzer, P., … Atun, R. (2017). Quasi-experimental study designs series-paper 4: Uses and value. Journal of Clinical Epidemiology, 89, 21–29. https://doi.org/10.1016/j.jclinepi.2017.03.012

Baijnath, S., Moodley, C., Ngcobo, B., Singh, S. D., Kruger, H. G., Arvidsson, P. I., … Govender, T. (2017). Clofazimine protects against mycobacterium tuberculosis dissemination in the CNS following an aerosol challenge in a murine model. International Journal of Antimicrobial Agents. https://doi.org/10.1016/j.ijantimicag.2017.08.020

Baijnath, S., Moodley, C., Ngcobo, B., Singh, S. D., Kruger, H. G., Arvidsson, P. I., … Govender, T. (2017). Clofazimine protects against mycobacterium tuberculosis dissemination in the CNS following an aerosol challenge in a murine model. International Journal of Antimicrobial Agents. https://doi.org/10.1016/j.ijantimicag.2017.08.020

Bernays, S., Bukenya, D., Thompson, C., Ssembajja, F., & Seeley, J. (2017). Being an ‘adolescent’: The consequences of gendered risks for young people in rural Uganda. Childhood, 0907568217732119. https://doi.org/10.1177/0907568217732119

Bernays, S., Bukenya, D., Thompson, C., Ssembajja, F., & Seeley, J. (2017). Being an ‘adolescent’: The consequences of gendered risks for young people in rural Uganda. Childhood, 0907568217732119. https://doi.org/10.1177/0907568217732119

Bhattacharya, D., Danaviah, S., Muema, D. M., Akilimali, N. A., Moodley, P., Ndung’u, T., & Das, G. (2017). Cellular Architecture of Spinal Granulomas and the Immunological Response in Tuberculosis Patients Coinfected with HIV. Frontiers in Immunology, 8, 1120. https://doi.org/10.3389/fimmu.2017.01120

Bhattacharya, D., Danaviah, S., Muema, D. M., Akilimali, N. A., Moodley, P., Ndung’u, T., & Das, G. (2017). Cellular Architecture of Spinal Granulomas and the Immunological Response in Tuberculosis Patients Coinfected with HIV. Frontiers in Immunology, 8, 1120. https://doi.org/10.3389/fimmu.2017.01120

Bocquier, P., Ginsburg, C., Herbst, K., Sankoh, O., & Collinson, M. A. (2017). A training manual for event history data management using Health and Demographic Surveillance System data. BMC Research Notes, 10(1), 224–224. https://doi.org/10.1186/s13104-017-2541-9

Bohlius, J. (2017). Comparison of Kaposi sarcoma risk in HIV-positive adults across five continents: a multiregional multicohort study. Clinical Infectious Diseases. https://doi.org/10.1093/cid/cix480

Bohlius, J. (2017). Comparison of Kaposi sarcoma risk in HIV-positive adults across five continents: a multiregional multicohort study. Clinical Infectious Diseases. https://doi.org/10.1093/cid/cix480

Bor, J., Ahmed, S., Fox, M. P., Rosen, S., Meyer-Rath, G., Katz, I. T., … Bärnighausen, T. (2017). Effect of eliminating CD4-count thresholds on HIV treatment initiation in South Africa: An empirical modeling study. PLOS ONE, 12(6), e0178249. https://doi.org/10.1371/journal.pone.0178249

Bor, J., Ahmed, S., Fox, M. P., Rosen, S., Meyer-Rath, G., Katz, I. T., … Bärnighausen, T. (2017). Effect of eliminating CD4-count thresholds on HIV treatment initiation in South Africa: An empirical modeling study. PLOS ONE, 12(6), e0178249. https://doi.org/10.1371/journal.pone.0178249

Bor, J., Chiu, C., Ahmed, S., Katz, I., Fox, M., Rosen, S., … Bärnighausen, T. (2017). Failure to initiate HIV treatment in patients with high CD4 counts: evidence from demographic surveillance in rural KwaZulu-Natal. Tropical Medicine & International Health, n/a-n/a. https://doi.org/10.1111/tmi.13013

Bor, J., Chiu, C., Ahmed, S., Katz, I., Fox, M., Rosen, S., … Bärnighausen, T. (2017). Failure to initiate HIV treatment in patients with high CD4 counts: evidence from demographic surveillance in rural KwaZulu-Natal. Tropical Medicine & International Health, n/a-n/a. https://doi.org/10.1111/tmi.13013

Bor, J., Fox, M. P., Rosen, S., Venkataramani, A., Tanser, F., Pillay, D., & Bärnighausen, T. (2017). Treatment eligibility and retention in clinical HIV care: A regression discontinuity study in South Africa. PLOS Medicine, 14(11), e1002463. https://doi.org/10.1371/journal.pmed.1002463 

Bor, J., Fox, M. P., Rosen, S., Venkataramani, A., Tanser, F., Pillay, D., & Bärnighausen, T. (2017). Treatment eligibility and retention in clinical HIV care: A regression discontinuity study in South Africa. PLOS Medicine, 14(11), e1002463. https://doi.org/10.1371/journal.pmed.1002463 

Brennan, A. T., Davies, M.-A., Bor, J., Wandeler, G., Stinson, K., Wood, R., … Fox, M. P. (2017). Has the phasing out of stavudine in accordance with changes in WHO guidelines led to a decrease in single-drug substitutions in first-line antiretroviral therapy for HIV in sub-Saharan Africa? AIDS, 31(1). Retrieved from http://journals.lww.com/aidsonline/Fulltext/2017/01020/Has_the_phasing_out_of_stavudine_in_accordance.16.aspx

Brennan, A. T., Davies, M.-A., Bor, J., Wandeler, G., Stinson, K., Wood, R., … Fox, M. P. (2017). Has the phasing out of stavudine in accordance with changes in WHO guidelines led to a decrease in single-drug substitutions in first-line antiretroviral therapy for HIV in sub-Saharan Africa? AIDS, 31(1). Retrieved from http://journals.lww.com/aidsonline/Fulltext/2017/01020/Has_the_phasing_out_of_stavudine_in_accordance.16.aspx

Bärnighausen, T. (2017). Population health intervention research: three important advancements. International Journal of Public Health. https://doi.org/10.1007/s00038-017-0985-2

Bärnighausen, T. (2017). Population health intervention research: three important advancements. International Journal of Public Health. https://doi.org/10.1007/s00038-017-0985-2

Bukenya, D., Wringe, A., Moshabela, M., Skovdal, M., Ssekubugu, R., Paparini, S., … Seeley, J. (2017). Where are we now? A multicountry qualitative study to explore access to pre-antiretroviral care services: a precursor to antiretroviral therapy initiation. Sexually Transmitted Infections, 93(Suppl 3). https://doi.org/10.1136/sextrans-2016-052970

Bukenya, D., Wringe, A., Moshabela, M., Skovdal, M., Ssekubugu, R., Paparini, S., … Seeley, J. (2017). Where are we now? A multicountry qualitative study to explore access to pre-antiretroviral care services: a precursor to antiretroviral therapy initiation. Sexually Transmitted Infections, 93(Suppl 3). https://doi.org/10.1136/sextrans-2016-052970

Chanda, M. M., Ortblad, K. F., Mwale, M., Chongo, S., Kanchele, C., Kamungoma, N., … Oldenburg, C. E. (2017). HIV self-testing among female sex workers in Zambia: A cluster randomized controlled trial. PLOS Medicine, 14(11), e1002442. https://doi.org/10.1371/journal.pmed.1002442

Chanda, M. M., Ortblad, K. F., Mwale, M., Chongo, S., Kanchele, C., Kamungoma, N., … Oldenburg, C. E. (2017). Contraceptive use and unplanned pregnancy among female sex workers in Zambia. Contraception, 96(3), 196–202. https://doi.org/10.1016/j.contraception.2017.07.003

Chanda, M. M., Ortblad, K. F., Mwale, M., Chongo, S., Kanchele, C., Kamungoma, N., … Oldenburg, C. E. (2017). HIV self-testing among female sex workers in Zambia: A cluster randomized controlled trial. PLOS Medicine, 14(11), e1002442. https://doi.org/10.1371/journal.pmed.1002442

Chanda, M. M., Ortblad, K. F., Mwale, M., Chongo, S., Kanchele, C., Kamungoma, N., … Oldenburg, C. E. (2017). Contraceptive use and unplanned pregnancy among female sex workers in Zambia. Contraception, 96(3), 196–202. https://doi.org/10.1016/j.contraception.2017.07.003

Chang, C. C., Kangethe, R., Omarjee, S., Hiramen, K., Gosnell, B., Sojane, K., … Ndung’u, T. (2017). Relationship of Human Immunodeficiency Virus Viral Load in Cerebrospinal Fluid and Plasma in Patients Co-infected With Cryptococcal Meningitis. Open Forum Infectious Diseases, 4(2). https://doi.org/10.1093/ofid/ofx032

Chang, C. C., Kangethe, R., Omarjee, S., Hiramen, K., Gosnell, B., Sojane, K., … Ndung’u, T. (2017). Relationship of Human Immunodeficiency Virus Viral Load in Cerebrospinal Fluid and Plasma in Patients Co-infected With Cryptococcal Meningitis. Open Forum Infectious Diseases, 4(2). https://doi.org/10.1093/ofid/ofx032

Collier, D., Iwuji, C., Derache, A., de Oliveira, T., Okesola, N., Calmy, A., … Gupta, R. K. (2017). Virological Outcomes of Second-line Protease Inhibitor–Based Treatment for Human Immunodeficiency Virus Type 1 in a High-Prevalence Rural South African Setting: A Competing-Risks Prospective Cohort Analysis. Clinical Infectious Diseases, 64(8), 1006–1016. https://doi.org/10.1093/cid/cix015

Collier, D., Iwuji, C., Derache, A., de Oliveira, T., Okesola, N., Calmy, A., … Gupta, R. K. (2017). Virological Outcomes of Second-line Protease Inhibitor–Based Treatment for Human Immunodeficiency Virus Type 1 in a High-Prevalence Rural South African Setting: A Competing-Risks Prospective Cohort Analysis. Clinical Infectious Diseases, 64(8), 1006–1016. https://doi.org/10.1093/cid/cix015

Cordes, J. L., Stangl, A., Krishnaratne, S., Hoddinott, G., Mathema, H., Bond, V., … Hargreaves, J. R. (2017). Trends in Responses to DHS Questions Should Not Be Interpreted as Reflecting an Increase in “Anticipated Stigma” in Africa: JAIDS Journal of Acquired Immune Deficiency Syndromes, 75(1), e22–e23. https://doi.org/10.1097/QAI.0000000000001328

Cordes, J. L., Stangl, A., Krishnaratne, S., Hoddinott, G., Mathema, H., Bond, V., … Hargreaves, J. R. (2017). Trends in Responses to DHS Questions Should Not Be Interpreted as Reflecting an Increase in “Anticipated Stigma” in Africa: JAIDS Journal of Acquired Immune Deficiency Syndromes, 75(1), e22–e23. https://doi.org/10.1097/QAI.0000000000001328

Cornell, M., Johnson, L. F., Wood, R., Tanser, F., Fox, M. P., Prozesky, H., … Boulle, A. (2017). Twelve-year mortality in adults initiating antiretroviral therapy in South Africa. Journal of the International AIDS Society, 20(1). https://doi.org/10.7448/IAS.20.1.21902

Cornell, M., Johnson, L. F., Wood, R., Tanser, F., Fox, M. P., Prozesky, H., … Boulle, A. (2017). Twelve-year mortality in adults initiating antiretroviral therapy in South Africa. Journal of the International AIDS Society, 20(1). https://doi.org/10.7448/IAS.20.1.21902

Cox, H., Dickson-Hall, L., Ndjeka, N., van’t Hoog, A., Grant, A., Cobelens, F., … Nicol, M. (2017). Delays and loss to follow-up before treatment of drug-resistant tuberculosis following implementation of Xpert MTB/RIF in South Africa: A retrospective cohort study. PLOS Medicine, 14(2), e1002238. https://doi.org/10.1371/journal.pmed.1002238

Cox, H., Dickson-Hall, L., Ndjeka, N., van’t Hoog, A., Grant, A., Cobelens, F., … Nicol, M. (2017). Delays and loss to follow-up before treatment of drug-resistant tuberculosis following implementation of Xpert MTB/RIF in South Africa: A retrospective cohort study. PLOS Medicine, 14(2), e1002238. https://doi.org/10.1371/journal.pmed.1002238

Cuadros, D. F., Li, J., Branscum, A. J., Akullian, A., Jia, P., Mziray, E. N., & Tanser, F. (2017). Mapping the spatial variability of HIV infection in Sub-Saharan Africa: Effective information for localized HIV prevention and control. Scientific Reports, 7(1), 9093. https://doi.org/10.1038/s41598-017-09464-y

Cuadros, D. F., Li, J., Branscum, A. J., Akullian, A., Jia, P., Mziray, E. N., & Tanser, F. (2017). Mapping the spatial variability of HIV infection in Sub-Saharan Africa: Effective information for localized HIV prevention and control. Scientific Reports, 7(1), 9093. https://doi.org/10.1038/s41598-017-09464-y

Cumming, B. M., Chinta, K. C., Reddy, V. P., & Steyn, A. J. C. (2017). Role of Ergothioneine in Microbial Physiology and Pathogenesis. Antioxidants & Redox Signaling. https://doi.org/10.1089/ars.2017.7300

Cumming, B. M., Chinta, K. C., Reddy, V. P., & Steyn, A. J. C. (2017). Role of Ergothioneine in Microbial Physiology and Pathogenesis. Antioxidants & Redox Signaling. https://doi.org/10.1089/ars.2017.7300

Cumming, B. M., Rahman, M. A., Lamprecht, D. A., Rohde, K. H., Saini, V., Adamson, J. H., … Steyn, A. J. C. (2017). Mycobacterium tuberculosis arrests host cycle at the G1/S transition to establish long term infection. PLOS Pathogens, 13(5), e1006389. https://doi.org/10.1371/journal.ppat.1006389

Cumming, B. M., Rahman, M. A., Lamprecht, D. A., Rohde, K. H., Saini, V., Adamson, J. H., … Steyn, A. J. C. (2017). Mycobacterium tuberculosis arrests host cycle at the G1/S transition to establish long term infection. PLOS Pathogens, 13(5), e1006389. https://doi.org/10.1371/journal.ppat.1006389

De Neve, J.-W., & Harling, G. (2017). Offspring schooling associated with increased parental survival in rural KwaZulu-Natal, South Africa. Social Science & Medicine, 176, 149–157. https://doi.org/10.1016/j.socscimed.2017.01.015

De Neve, J.-W., & Harling, G. (2017). Offspring schooling associated with increased parental survival in rural KwaZulu-Natal, South Africa. Social Science & Medicine, 176, 149–157. https://doi.org/10.1016/j.socscimed.2017.01.015

de Welzen, L., Eldholm, V., Maharaj, K., Manson, A. L., Earl, A. M., & Pym, A. S. (2017). Whole transcriptome and genomic analysis of extensively drug-resistant Mycobacterium tuberculosis clinical isolates identifies downregulation of ethA as a mechanism of ethionamide resistance. Antimicrobial Agents and Chemotherapyhttps://doi.org/10.1128/AAC.01461-17

de Welzen, L., Eldholm, V., Maharaj, K., Manson, A. L., Earl, A. M., & Pym, A. S. (2017). Whole transcriptome and genomic analysis of extensively drug-resistant Mycobacterium tuberculosis clinical isolates identifies downregulation of ethA as a mechanism of ethionamide resistance. Antimicrobial Agents and Chemotherapyhttps://doi.org/10.1128/AAC.01461-17

Dobra, A., Bärnighausen, T., Vandormael, A., & Tanser, F. (2017). Space-time migration patterns and risk of HIV acquisition in rural South Africa. AIDS (London, England), 31(1), 137–145. https://doi.org/10.1097/QAD.0000000000001292

Dobra, A., Bärnighausen, T., Vandormael, A., & Tanser, F. (2017). Space-time migration patterns and risk of HIV acquisition in rural South Africa. AIDS (London, England), 31(1), 137–145. https://doi.org/10.1097/QAD.0000000000001292

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Dowdy, D. W., Grant, A. D., Dheda, K., Nardell, E., Fielding, K., & Moore, D. A. J. (2017). Designing and Evaluating Interventions to Halt the Transmission of Tuberculosis. The Journal of Infectious Diseases216(suppl_6), S654–S661. https://doi.org/10.1093/infdis/jix320 

Dowdy, D. W., Grant, A. D., Dheda, K., Nardell, E., Fielding, K., & Moore, D. A. J. (2017). Designing and Evaluating Interventions to Halt the Transmission of Tuberculosis. The Journal of Infectious Diseases216(suppl_6), S654–S661. https://doi.org/10.1093/infdis/jix320 

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Geldsetzer, P., De Neve, J.-W., Boudreaux, C., Bärnighausen, T., & Bossert, T. J. (2017). Improving the performance of community health workers in Swaziland: findings from a qualitative study. Human Resources for Health, 15(1), 68. https://doi.org/10.1186/s12960-017-0236-x

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Geldsetzer, P., Feigl, A. B., Tanser, F., Gareta, D., Pillay, D., & Bärnighausen, T. (2017). Population-level decline in BMI and systolic blood pressure following mass HIV treatment: Evidence from rural KwaZulu-Natal: Decline in BMI and BP following Mass HIV Treatment. Obesity, 25(1), 200–206. https://doi.org/10.1002/oby.21663

Geldsetzer, P., Feigl, A. B., Tanser, F., Gareta, D., Pillay, D., & Bärnighausen, T. (2017). Population-level decline in BMI and systolic blood pressure following mass HIV treatment: Evidence from rural KwaZulu-Natal: Decline in BMI and BP following Mass HIV Treatment. Obesity, 25(1), 200–206. https://doi.org/10.1002/oby.21663

Godfrey, C., Thigpen, M. C., Crawford, K. W., Jean-Phillippe, P., Pillay, D., Persaud, D., … Fitzgibbon, J. (2017). Global HIV Antiretroviral Drug Resistance. The Journal of Infectious Diseases. https://doi.org/10.1093/infdis/jix137

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Goodall, R. L., Dunn, D. T., Nkurunziza, P., Mugarura, L., Pattery, T., Munderi, P., … Gupta, R. K. (2017). Rapid accumulation of HIV-1 thymidine analogue mutations and phenotypic impact following prolonged viral failure on zidovudine-based first-line ART in sub-Saharan Africa. Journal of Antimicrobial Chemotherapy, 72(5), 1450–1455. https://doi.org/10.1093/jac/dkw583

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Gupta, R. K., Gregson, J., Parkin, N., Haile-Selassie, H., Tanuri, A., Andrade Forero, L., … Bertagnolio, S. (2017). HIV-1 drug resistance before initiation or re-initiation of first-line antiretroviral therapy in low-income and middle-income countries: a systematic review and meta-regression analysis. The Lancet Infectious Diseases. https://doi.org/10.1016/S1473-3099(17)30702-8 

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Haber, N., Tanser, F., Bor, J., Naidu, K., Mutevedzi, T., Herbst, K., … Bärnighausen, T. (2017). From HIV infection to therapeutic response: a population-based longitudinal HIV cascade-of-care study in KwaZulu-Natal, South Africa. The Lancet HIV, 4(5), e223–e230. https://doi.org/10.1016/S2352-3018(16)30224-7

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Hainsworth, E. G., Shahmanesh, M., & Stevenson, F. (2017). Exploring the views and experiences of HIV positive patients treated for cancer: a systematic review of the literature. AIDS Care, 1–9. https://doi.org/10.1080/09540121.2017.1381332

Hanifa, Y., Fielding, K. L., Chihota, V. N., Adonis, L., Charalambous, S., Foster, N., … Grant, A. D. (2017). A clinical scoring system to prioritise investigation for tuberculosis among adults attending HIV clinics in South Africa. PLOS ONE, 12(8), e0181519. https://doi.org/10.1371/journal.pone.0181519

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Harling, G., Gumede, D., Mutevedzi, T., McGrath, N., Seeley, J., Pillay, D., … Herbst, A. J. (2017). The impact of self-interviews on response patterns for sensitive topics: a randomized trial of electronic delivery methods for a sexual behaviour questionnaire in rural South Africa. BMC Medical Research Methodology, 17(1), 125. https://doi.org/10.1186/s12874-017-0403-8

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Mabuka, J. M., Dugast, A.-S., Muema, D. M., Reddy, T., Ramlakhan, Y., Euler, Z., … Ndung’u, T. (2017). Plasma CXCL13 but Not B Cell Frequencies in Acute HIV Infection Predicts Emergence of Cross-Neutralizing Antibodies. Frontiers in Immunology, 8, 1104. https://doi.org/10.3389/fimmu.2017.01104

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Mkwanazi, N. B., Rochat, T. J., & Bland, R. M. (2017). The Amagugu intervention: a qualitative investigation into maternal experiences and perspectives of a maternal HIV disclosure support intervention in rural South Africa. Health Policy and Planning32(9), 1231–1240. https://doi.org/10.1093/heapol/czx056

Mkwanazi, N. B., Rochat, T. J., & Bland, R. M. (2017). The Amagugu intervention: a qualitative investigation into maternal experiences and perspectives of a maternal HIV disclosure support intervention in rural South Africa. Health Policy and Planning32(9), 1231–1240. https://doi.org/10.1093/heapol/czx056

Mlcochova, P., Caswell, S. J., Taylor, I. A., Towers, G. J., & Gupta, R. K. (2017). DNA damage induced by topoisomerase inhibitors activates SAMHD1 and blocks HIV-1 infection of macrophages. The EMBO Journal, e201796880. https://doi.org/10.15252/embj.201796880

Mlcochova, P., Caswell, S. J., Taylor, I. A., Towers, G. J., & Gupta, R. K. (2017). DNA damage induced by topoisomerase inhibitors activates SAMHD1 and blocks HIV-1 infection of macrophages. The EMBO Journal, e201796880. https://doi.org/10.15252/embj.201796880

Mlcochova, P., Sutherland, K. A., Watters, S. A., Bertoli, C., de Bruin, R. A., Rehwinkel, J., … Gupta, R. K. (2017). A G1?like state allows HIV?1 to bypass SAMHD1 restriction in macrophages. The EMBO Journal, 36(5), 604–616. https://doi.org/10.15252/embj.201696025

Mlcochova, P., Sutherland, K. A., Watters, S. A., Bertoli, C., de Bruin, R. A., Rehwinkel, J., … Gupta, R. K. (2017). A G1?like state allows HIV?1 to bypass SAMHD1 restriction in macrophages. The EMBO Journal, 36(5), 604–616. https://doi.org/10.15252/embj.201696025

Moosa, A., Lamprecht, D. A., Arora, K., Barry, C. E., Boshoff, H. I. M., Ioerger, T. R., … Warner, D. F. (2017). Susceptibility of Mycobacterium tuberculosis Cytochrome bd Oxidase Mutants to Compounds Targeting the Terminal Respiratory Oxidase, Cytochrome c. Antimicrobial Agents and Chemotherapy, 61(10), e01338-17. https://doi.org/10.1128/AAC.01338-17

Moosa, A., Lamprecht, D. A., Arora, K., Barry, C. E., Boshoff, H. I. M., Ioerger, T. R., … Warner, D. F. (2017). Susceptibility of Mycobacterium tuberculosis Cytochrome bd Oxidase Mutants to Compounds Targeting the Terminal Respiratory Oxidase, Cytochrome c. Antimicrobial Agents and Chemotherapy, 61(10), e01338-17. https://doi.org/10.1128/AAC.01338-17

Moshabela, M., Bukenya, D., Darong, G., Wamoyi, J., McLean, E., Skovdal, M., … Wringe, A. (2017). Traditional healers, faith healers and medical practitioners: the contribution of medical pluralism to bottlenecks along the cascade of care for HIV/AIDS in Eastern and Southern Africa. Sexually Transmitted Infections, 93(Suppl 3), e052974. https://doi.org/10.1136/sextrans-2016-052974

Moshabela, M., Bukenya, D., Darong, G., Wamoyi, J., McLean, E., Skovdal, M., … Wringe, A. (2017). Traditional healers, faith healers and medical practitioners: the contribution of medical pluralism to bottlenecks along the cascade of care for HIV/AIDS in Eastern and Southern Africa. Sexually Transmitted Infections, 93(Suppl 3), e052974. https://doi.org/10.1136/sextrans-2016-052974

Mudzengi, D., Sweeney, S., Hippner, P., Kufa, T., Fielding, K., Grant, A. D., … Vassall, A. (2017). The patient costs of care for those with TB and HIV: a cross-sectional study from South Africa. Health Policy and Planning. https://doi.org/10.1093/heapol/czw183

Mudzengi, D., Sweeney, S., Hippner, P., Kufa, T., Fielding, K., Grant, A. D., … Vassall, A. (2017). The patient costs of care for those with TB and HIV: a cross-sectional study from South Africa. Health Policy and Planning. https://doi.org/10.1093/heapol/czw183

Mwimanzi, F., Toyoda, M., Mahiti, M., Mann, J. K., Martin, J. N., Bangsberg, D., … Ueno, T. (2017). Relative resistance of MHC-B to Nef-mediated downregulation is conserved among primate lentiviruses and influences antiviral T cell responses in HIV-1-infected individuals. Journal of Virology. https://doi.org/10.1128/JVI.01409-17

Mwimanzi, F., Toyoda, M., Mahiti, M., Mann, J. K., Martin, J. N., Bangsberg, D., … Ueno, T. (2017). Relative resistance of MHC-B to Nef-mediated downregulation is conserved among primate lentiviruses and influences antiviral T cell responses in HIV-1-infected individuals. Journal of Virology. https://doi.org/10.1128/JVI.01409-17

Naburi, H., Mujinja, P., Kilewo, C., Orsini, N., Bärnighausen, T., Manji, K., … Ekström, A. M. (2017). Job satisfaction and turnover intentions among health care staff providing services for prevention of mother-to-child transmission of HIV in Dar es Salaam, Tanzania. Human Resources for Health, 15, 61. https://doi.org/10.1186/s12960-017-0235-y

Naburi, H., Mujinja, P., Kilewo, C., Orsini, N., Bärnighausen, T., Manji, K., … Ekström, A. M. (2017). Job satisfaction and turnover intentions among health care staff providing services for prevention of mother-to-child transmission of HIV in Dar es Salaam, Tanzania. Human Resources for Health, 15, 61. https://doi.org/10.1186/s12960-017-0235-y

Naidoo, V. L., Mann, J. K., Noble, C., Adland, E., Carlson, J. M., Thomas, J., … Ndung’u, T. (2017). Mother-to-Child HIV Transmission Bottleneck Selects for Consensus Virus with Lower Gag-Protease-Driven Replication Capacity. Journal of Virology, 91(17), e00518-17. https://doi.org/10.1128/JVI.00518-17

Naidoo, V. L., Mann, J. K., Noble, C., Adland, E., Carlson, J. M., Thomas, J., … Ndung’u, T. (2017). Mother-to-Child HIV Transmission Bottleneck Selects for Consensus Virus with Lower Gag-Protease-Driven Replication Capacity. Journal of Virology, 91(17), e00518-17. https://doi.org/10.1128/JVI.00518-17

Ngcapu, S., Theys, K., Libin, P., Marconi, C. V., Sunpath, H., Ndung’u, T., & Gordon, L. M. (2017). Characterization of Nucleoside Reverse Transcriptase Inhibitor-Associated Mutations in the RNase H Region of HIV-1 Subtype C Infected Individuals. Viruses9(11). https://doi.org/10.3390/v9110330

Ngcapu, S., Theys, K., Libin, P., Marconi, C. V., Sunpath, H., Ndung’u, T., & Gordon, L. M. (2017). Characterization of Nucleoside Reverse Transcriptase Inhibitor-Associated Mutations in the RNase H Region of HIV-1 Subtype C Infected Individuals. Viruses9(11). https://doi.org/10.3390/v9110330

Ortblad, K., Kibuuka Musoke, D., Ngabirano, T., Nakitende, A., Magoola, J., Kayiira, P., … Bärnighausen, T. (2017). Direct provision versus facility collection of HIV self-tests among female sex workers in Uganda: A cluster-randomized controlled health systems trial. PLOS Medicine, 14(11), e1002458. https://doi.org/10.1371/journal.pmed.1002458

Ortblad, K., Kibuuka Musoke, D., Ngabirano, T., Nakitende, A., Magoola, J., Kayiira, P., … Bärnighausen, T. (2017). Direct provision versus facility collection of HIV self-tests among female sex workers in Uganda: A cluster-randomized controlled health systems trial. PLOS Medicine, 14(11), e1002458. https://doi.org/10.1371/journal.pmed.1002458

Paquette, R., Tanton, C., Burns, F., Prah, P., Shahmanesh, M., Field, N., … Mercer, C. H. (2017). Illicit drug use and its association with key sexual risk behaviours and outcomes: Findings from Britain’s third National Survey of Sexual Attitudes and Lifestyles (Natsal-3). PLoS ONE, 12(5), e0177922. https://doi.org/10.1371/journal.pone.0177922

Paquette, R., Tanton, C., Burns, F., Prah, P., Shahmanesh, M., Field, N., … Mercer, C. H. (2017). Illicit drug use and its association with key sexual risk behaviours and outcomes: Findings from Britain’s third National Survey of Sexual Attitudes and Lifestyles (Natsal-3). PLoS ONE, 12(5), e0177922. https://doi.org/10.1371/journal.pone.0177922

Paredes, R., Tzou, P. L., van Zyl, G., Barrow, G., Camacho, R., Carmona, S., … Shafer, R. W. (2017). Collaborative update of a rule-based expert system for HIV-1 genotypic resistance test interpretation. PLOS ONE, 12(7), e0181357. https://doi.org/10.1371/journal.pone.0181357

Paredes, R., Tzou, P. L., van Zyl, G., Barrow, G., Camacho, R., Carmona, S., … Shafer, R. W. (2017). Collaborative update of a rule-based expert system for HIV-1 genotypic resistance test interpretation. PLOS ONE, 12(7), e0181357. https://doi.org/10.1371/journal.pone.0181357

Patenaude, B. N., Chimbindi, N., Pillay, D., & Bärnighausen, T. (2017). The impact of ART initiation on household food security over time. Social Science & Medicine. https://doi.org/10.1016/j.socscimed.2017.11.036

Patenaude, B. N., Chimbindi, N., Pillay, D., & Bärnighausen, T. (2017). The impact of ART initiation on household food security over time. Social Science & Medicine. https://doi.org/10.1016/j.socscimed.2017.11.036

Phillips, A. N., Cambiano, V., Nakagawa, F., Revill, P., Jordan, M. R., Hallett, T. B., … Bertagnolio, S. (2017). Cost-effectiveness of public-health policy options in the presence of pretreatment NNRTI drug resistance in sub-Saharan Africa: a modelling study. The Lancet HIV. https://doi.org/10.1016/S2352-3018(17)30190-X

 

Phillips, A. N., Cambiano, V., Nakagawa, F., Revill, P., Jordan, M. R., Hallett, T. B., … Bertagnolio, S. (2017). Cost-effectiveness of public-health policy options in the presence of pretreatment NNRTI drug resistance in sub-Saharan Africa: a modelling study. The Lancet HIV. https://doi.org/10.1016/S2352-3018(17)30190-X

 

Phillips, A. N., Stover, J., Cambiano, V., Nakagawa, F., Jordan, M. R., Pillay, D., … Bertagnolio, S. (2017). Impact of HIV Drug Resistance on HIV/AIDS-Associated Mortality, New Infections, and Antiretroviral Therapy Program Costs in Sub–Saharan Africa. The Journal of Infectious Diseases, 215(9), 1362–1365. https://doi.org/10.1093/infdis/jix089

Phillips, A. N., Stover, J., Cambiano, V., Nakagawa, F., Jordan, M. R., Pillay, D., … Bertagnolio, S. (2017). Impact of HIV Drug Resistance on HIV/AIDS-Associated Mortality, New Infections, and Antiretroviral Therapy Program Costs in Sub–Saharan Africa. The Journal of Infectious Diseases, 215(9), 1362–1365. https://doi.org/10.1093/infdis/jix089

Plazy, M., Perriat, D., Gumede, D., Boyer, S., Pillay, D., Dabis, F., Seeley, J., Orne-Gliemann, J. (2017). Implementing universal HIV treatment in a high HIV prevalence and rural South African setting – Field experiences and recommendations of health care providers. PLOS ONE12(11), e0186883. https://doi.org/10.1371/journal.pone.0186883

Plazy, M., Perriat, D., Gumede, D., Boyer, S., Pillay, D., Dabis, F., Seeley, J., Orne-Gliemann, J. (2017). Implementing universal HIV treatment in a high HIV prevalence and rural South African setting – Field experiences and recommendations of health care providers. PLOS ONE12(11), e0186883. https://doi.org/10.1371/journal.pone.0186883

Power, R. A., Tansey, K. E., Buttenschøn, H. N., Cohen-Woods, S., Bigdeli, T., Hall, L. S., … Lewis, C. M. (2017). Genome-wide Association for Major Depression Through Age at Onset Stratification: Major Depressive Disorder Working Group of the Psychiatric Genomics Consortium. Biological Psychiatry, 81(4), 325–335. https://doi.org/10.1016/j.biopsych.2016.05.010

Power, R. A., Tansey, K. E., Buttenschøn, H. N., Cohen-Woods, S., Bigdeli, T., Hall, L. S., … Lewis, C. M. (2017). Genome-wide Association for Major Depression Through Age at Onset Stratification: Major Depressive Disorder Working Group of the Psychiatric Genomics Consortium. Biological Psychiatry, 81(4), 325–335. https://doi.org/10.1016/j.biopsych.2016.05.010

Price, H., Dunn, D., Zachary, T., Vudriko, T., Chirara, M., Kityo, C., … Gilson, R. (2017). Hepatitis B serological markers and plasma DNA concentrations: baseline results from a treatment-monitoring practices trial. AIDS, 31(8), 1109–1117. https://doi.org/10.1097/QAD.0000000000001454

Price, H., Dunn, D., Zachary, T., Vudriko, T., Chirara, M., Kityo, C., … Gilson, R. (2017). Hepatitis B serological markers and plasma DNA concentrations: baseline results from a treatment-monitoring practices trial. AIDS, 31(8), 1109–1117. https://doi.org/10.1097/QAD.0000000000001454

Ratmann, O., Wymant, C., Colijn, C., Danaviah, S., Essex, M., Frost, S., … on behalf of the PANGEA-HIV Consort. (2017). HIV-1 Full-Genome Phylogenetics of Generalized Epidemics in Sub-Saharan Africa: Impact of Missing Nucleotide Characters in Next-Generation Sequences. AIDS Research and Human Retroviruses. https://doi.org/10.1089/aid.2017.0061

Ratmann, O., Wymant, C., Colijn, C., Danaviah, S., Essex, M., Frost, S., … on behalf of the PANGEA-HIV Consort. (2017). HIV-1 Full-Genome Phylogenetics of Generalized Epidemics in Sub-Saharan Africa: Impact of Missing Nucleotide Characters in Next-Generation Sequences. AIDS Research and Human Retroviruses. https://doi.org/10.1089/aid.2017.0061

Reimers, P., Israel-Ballard, K., Craig, M., Spies, L., Thior, I., Tanser, F., & Coutsoudis, A. (2017). A Cluster Randomised Trial to Determine the Efficacy of the “Feeding Buddies” Programme in Improving Exclusive Breastfeeding Rates Among HIV-Infected Women in Rural KwaZulu-Natal, South Africa. AIDS and Behavior. https://doi.org/10.1007/s10461-017-1865-8

Reimers, P., Israel-Ballard, K., Craig, M., Spies, L., Thior, I., Tanser, F., & Coutsoudis, A. (2017). A Cluster Randomised Trial to Determine the Efficacy of the “Feeding Buddies” Programme in Improving Exclusive Breastfeeding Rates Among HIV-Infected Women in Rural KwaZulu-Natal, South Africa. AIDS and Behavior. https://doi.org/10.1007/s10461-017-1865-8

Reniers, G., Blom, S., Lieber, J., Herbst, A. J., Calvert, C., Bor, J., … Hosegood, V. (2017). Tuberculosis mortality and the male survival deficit in rural South Africa: An observational community cohort study. PLOS ONE, 12(10), e0185692. https://doi.org/10.1371/journal.pone.0185692

Reniers, G., Blom, S., Lieber, J., Herbst, A. J., Calvert, C., Bor, J., … Hosegood, V. (2017). Tuberculosis mortality and the male survival deficit in rural South Africa: An observational community cohort study. PLOS ONE, 12(10), e0185692. https://doi.org/10.1371/journal.pone.0185692

Rhee, S.-Y., Varghese, V., Holmes, S. P., Van Zyl, G. U., Steegen, K., Boyd, M. A., … Shafer, R. W. (2017). Mutational Correlates of Virological Failure in Individuals Receiving a WHO-Recommended Tenofovir-Containing First-Line Regimen: An International Collaboration. EBioMedicine, 18(Supplement C), 225–235. https://doi.org/10.1016/j.ebiom.2017.03.024

Rhee, S.-Y., Varghese, V., Holmes, S. P., Van Zyl, G. U., Steegen, K., Boyd, M. A., … Shafer, R. W. (2017). Mutational Correlates of Virological Failure in Individuals Receiving a WHO-Recommended Tenofovir-Containing First-Line Regimen: An International Collaboration. EBioMedicine, 18(Supplement C), 225–235. https://doi.org/10.1016/j.ebiom.2017.03.024

Rochat, T. J., Houle, B., Stein, A., Pearson, R. M., Newell, M. L., & Bland, R. M. (2017). Cohort Profile: The Siyakhula Cohort, rural South Africa. International Journal of Epidemiology, dyx148-dyx148. https://doi.org/10.1093/ije/dyx148

Rochat, T. J., Houle, B., Stein, A., Pearson, R. M., Newell, M. L., & Bland, R. M. (2017). Cohort Profile: The Siyakhula Cohort, rural South Africa. International Journal of Epidemiology, dyx148-dyx148. https://doi.org/10.1093/ije/dyx148

Rochat, T. J., Stein, A., Cortina-Borja, M., Tanser, F., & Bland, R. M. (2017). The Amagugu intervention for disclosure of maternal HIV to uninfected primary school-aged children in South Africa: a randomised controlled trial. The Lancet HIV. https://doi.org/10.1016/S2352-3018(17)30133-9

Rochat, T. J., Stein, A., Cortina-Borja, M., Tanser, F., & Bland, R. M. (2017). The Amagugu intervention for disclosure of maternal HIV to uninfected primary school-aged children in South Africa: a randomised controlled trial. The Lancet HIV. https://doi.org/10.1016/S2352-3018(17)30133-9

Rohr, J. K., Xavier Gómez-Olivé, F., Rosenberg, M., Manne-Goehler, J., Geldsetzer, P., Wagner, R. G., … Bärnighausen, T. (2017). Performance of self-reported HIV status in determining true HIV status among older adults in rural South Africa: a validation study. Journal of the International AIDS Society, 20(1). https://doi.org/10.7448/IAS.20.1.21691

Rohr, J. K., Xavier Gómez-Olivé, F., Rosenberg, M., Manne-Goehler, J., Geldsetzer, P., Wagner, R. G., … Bärnighausen, T. (2017). Performance of self-reported HIV status in determining true HIV status among older adults in rural South Africa: a validation study. Journal of the International AIDS Society, 20(1). https://doi.org/10.7448/IAS.20.1.21691

Rosenberg, M. S., Gómez-Olivé, F. X., Rohr, J. K., Houle, B. C., Kabudula, C. W., Wagner, R. G., … Bärnighausen, T. (2017). Sexual Behaviors and HIV Status: A Population-Based Study Among Older Adults in Rural South Africa. JAIDS Journal of Acquired Immune Deficiency Syndromes, 74(1), e9–e17. https://doi.org/10.1097/QAI.0000000000001173

Rosenberg, M. S., Gómez-Olivé, F. X., Rohr, J. K., Houle, B. C., Kabudula, C. W., Wagner, R. G., … Bärnighausen, T. (2017). Sexual Behaviors and HIV Status: A Population-Based Study Among Older Adults in Rural South Africa. JAIDS Journal of Acquired Immune Deficiency Syndromes, 74(1), e9–e17. https://doi.org/10.1097/QAI.0000000000001173

Rossouw, T., Nieuwoudt, M., Manasa, J., Malherbe, G., Lessells, R., Pillay, S., … de Oliveira, T. (2017). HIV drug resistance levels in adults failing first-line antiretroviral therapy in an urban and a rural setting in South Africa. HIV Medicine, 18(2), 104–114. https://doi.org/10.1111/hiv.12400

Rossouw, T., Nieuwoudt, M., Manasa, J., Malherbe, G., Lessells, R., Pillay, S., … de Oliveira, T. (2017). HIV drug resistance levels in adults failing first-line antiretroviral therapy in an urban and a rural setting in South Africa. HIV Medicine, 18(2), 104–114. https://doi.org/10.1111/hiv.12400

Sanya, R. E., Tumwesige, E., Elliott, A. M., & Seeley, J. (2017). Perceptions about interventions to control schistosomiasis among the Lake Victoria island communities of Koome, Uganda. PLOS Neglected Tropical Diseases, 11(10), e0005982. https://doi.org/10.1371/journal.pntd.0005982

Sanya, R. E., Tumwesige, E., Elliott, A. M., & Seeley, J. (2017). Perceptions about interventions to control schistosomiasis among the Lake Victoria island communities of Koome, Uganda. PLOS Neglected Tropical Diseases, 11(10), e0005982. https://doi.org/10.1371/journal.pntd.0005982

Schomaker, M., Leroy, V., Wolfs, T., Technau, K.-G., Renner, L., Judd, A., … Davies, M.-A. (2017). Optimal timing of antiretroviral treatment initiation in HIV-positive children and adolescents: a multiregional analysis from Southern Africa, West Africa and Europe. International Journal of Epidemiology, 46(2), 453–465. https://doi.org/10.1093/ije/dyw097

Schomaker, M., Leroy, V., Wolfs, T., Technau, K.-G., Renner, L., Judd, A., … Davies, M.-A. (2017). Optimal timing of antiretroviral treatment initiation in HIV-positive children and adolescents: a multiregional analysis from Southern Africa, West Africa and Europe. International Journal of Epidemiology, 46(2), 453–465. https://doi.org/10.1093/ije/dyw097

Schultze, A., Paredes, R., Sabin, C., Phillips, A. N., Pillay, D., Mackie, N., … Cozzi-Lepri, A. (2017). The association between detected drug resistance mutations and CD4+ T-cell decline in HIV-positive individuals maintained on a failing treatment regimen. Antiviral Therapy. https://doi.org/10.3851/IMP3178

Schultze, A., Paredes, R., Sabin, C., Phillips, A. N., Pillay, D., Mackie, N., … Cozzi-Lepri, A. (2017). The association between detected drug resistance mutations and CD4+ T-cell decline in HIV-positive individuals maintained on a failing treatment regimen. Antiviral Therapy. https://doi.org/10.3851/IMP3178

Seeley, J. (2017). HIV diagnosis increasing in older adults in Europe. The Lancet HIV. https://doi.org/10.1016/S2352-3018(17)30151-0

Seeley, J. (2017). HIV diagnosis increasing in older adults in Europe. The Lancet HIV. https://doi.org/10.1016/S2352-3018(17)30151-0

Shrestha, S., Chihota, V., White, R. G., Grant, A. D., Churchyard, G. J., & Dowdy, D. W. (2017). Impact of Targeted Tuberculosis Vaccination Among a Mining Population in South Africa: A Model-Based Study. American Journal of Epidemiology, 186(12), 1362–1369. https://doi.org/10.1093/aje/kwx192

Shrestha, S., Chihota, V., White, R. G., Grant, A. D., Churchyard, G. J., & Dowdy, D. W. (2017). Impact of Targeted Tuberculosis Vaccination Among a Mining Population in South Africa: A Model-Based Study. American Journal of Epidemiology, 186(12), 1362–1369. https://doi.org/10.1093/aje/kwx192

Siu, G. E., Wight, D., Seeley, J., Namutebi, C., Sekiwunga, R., Zalwango, F., & Kasule, S. (2017). Men’s Involvement in a Parenting Programme to Reduce Child Maltreatment and Gender-Based Violence: Formative Evaluation in Uganda. The European Journal of Development Research. https://doi.org/10.1057/s41287-017-0103-6

Siu, G. E., Wight, D., Seeley, J., Namutebi, C., Sekiwunga, R., Zalwango, F., & Kasule, S. (2017). Men’s Involvement in a Parenting Programme to Reduce Child Maltreatment and Gender-Based Violence: Formative Evaluation in Uganda. The European Journal of Development Research. https://doi.org/10.1057/s41287-017-0103-6

Skovdal, M., Wringe, A., Seeley, J., Renju, J., Paparini, S., Wamoyi, J., … Bonnington, O. (2017). Using theories of practice to understand HIV-positive persons varied engagement with HIV services: a qualitative study in six Sub-Saharan African countries. Sexually Transmitted Infections, 93(Suppl 3). https://doi.org/10.1136/sextrans-2016-052977

Skovdal, M., Wringe, A., Seeley, J., Renju, J., Paparini, S., Wamoyi, J., … Bonnington, O. (2017). Using theories of practice to understand HIV-positive persons varied engagement with HIV services: a qualitative study in six Sub-Saharan African countries. Sexually Transmitted Infections, 93(Suppl 3). https://doi.org/10.1136/sextrans-2016-052977

Ssali, A., Nunn, A., Mbonye, M., Anywaine, Z., & Seeley, J. (2017). Reasons for participating in a randomised clinical trial: The volunteers’ voices in the COSTOP trial in Uganda. Contemporary Clinical Trials Communications, 7(Supplement C), 44–47. https://doi.org/10.1016/j.conctc.2017.05.007

Ssali, A., Nunn, A., Mbonye, M., Anywaine, Z., & Seeley, J. (2017). Reasons for participating in a randomised clinical trial: The volunteers’ voices in the COSTOP trial in Uganda. Contemporary Clinical Trials Communications, 7(Supplement C), 44–47. https://doi.org/10.1016/j.conctc.2017.05.007

Suthar, A. B., & Bärnighausen, T. (2017). Antiretroviral therapy and population mortality: Leveraging routine national data to advance policy. PLOS Medicine, 14(12), e1002469. https://doi.org/10.1371/journal.pmed.1002469

Suthar, A. B., & Bärnighausen, T. (2017). Antiretroviral therapy and population mortality: Leveraging routine national data to advance policy. PLOS Medicine, 14(12), e1002469. https://doi.org/10.1371/journal.pmed.1002469

Suthar, A. B., Nagata, J. M., Nsanzimana, S., Bärnighausen, T., Negussie, E. K., & Doherty, M. C. (2017). Performance-based financing for improving HIV/AIDS service delivery: a systematic review. BMC Health Services Research, 17(1), 6. https://doi.org/10.1186/s12913-016-1962-9

Suthar, A. B., Nagata, J. M., Nsanzimana, S., Bärnighausen, T., Negussie, E. K., & Doherty, M. C. (2017). Performance-based financing for improving HIV/AIDS service delivery: a systematic review. BMC Health Services Research, 17(1), 6. https://doi.org/10.1186/s12913-016-1962-9

Tanser, F., Bärnighausen, T., Dobra, A., & Sartorius, B. (2017). Identifying ‘corridors of HIV transmission’ in a severely affected rural South African population: a case for a shift toward targeted prevention strategies. International Journal of Epidemiology. https://doi.org/10.1093/ije/dyx257 

Tanser, F., Bärnighausen, T., Dobra, A., & Sartorius, B. (2017). Identifying ‘corridors of HIV transmission’ in a severely affected rural South African population: a case for a shift toward targeted prevention strategies. International Journal of Epidemiology. https://doi.org/10.1093/ije/dyx257 

Tanser, F., Vandormael, A., Cuadros, D., Phillips, A. N., de Oliveira, T., Tomita, A., … Pillay, D. (2017). Effect of population viral load on prospective HIV incidence in a hyperendemic rural African community. Science Translational Medicine, 9(420), eaam8012. https://doi.org/10.1126/scitranslmed.aam8012 

Tanser, F., Vandormael, A., Cuadros, D., Phillips, A. N., de Oliveira, T., Tomita, A., … Pillay, D. (2017). Effect of population viral load on prospective HIV incidence in a hyperendemic rural African community. Science Translational Medicine, 9(420), eaam8012. https://doi.org/10.1126/scitranslmed.aam8012 

Thayyil, S., Oliveira, V., Lally, P. J., Swamy, R., Bassett, P., Chandrasekaran, M., … Shankaran, S. (2017). Hypothermia for encephalopathy in low and middle-income countries (HELIX): study protocol for a randomised controlled trial. Trials, 18(1), 432. https://doi.org/10.1186/s13063-017-2165-3

Thayyil, S., Oliveira, V., Lally, P. J., Swamy, R., Bassett, P., Chandrasekaran, M., … Shankaran, S. (2017). Hypothermia for encephalopathy in low and middle-income countries (HELIX): study protocol for a randomised controlled trial. Trials, 18(1), 432. https://doi.org/10.1186/s13063-017-2165-3

Thobakgale, C., Naidoo, K., McKinnon, L. R., Werner, L., Samsunder, N., Karim, S. A., … Naidoo, K. (2017). Interleukin 1-Beta (IL-1β) Production by Innate Cells Following TLR Stimulation Correlates With TB Recurrence in ART-Treated HIV-Infected Patients. JAIDS Journal of Acquired Immune Deficiency Syndromes, 74(2). Retrieved from http://journals.lww.com/jaids/Fulltext/2017/02010/Interleukin_1_Beta__IL_1___Production_by_Innate.16.aspx

Thobakgale, C., Naidoo, K., McKinnon, L. R., Werner, L., Samsunder, N., Karim, S. A., … Naidoo, K. (2017). Interleukin 1-Beta (IL-1β) Production by Innate Cells Following TLR Stimulation Correlates With TB Recurrence in ART-Treated HIV-Infected Patients. JAIDS Journal of Acquired Immune Deficiency Syndromes, 74(2). Retrieved from http://journals.lww.com/jaids/Fulltext/2017/02010/Interleukin_1_Beta__IL_1___Production_by_Innate.16.aspx

Titanji, B. K., Pillay, D., & Jolly, C. (2017). Combination antiretroviral therapy and cell–cell spread of wild-type and drug-resistant human immunodeficiency virus-1. Journal of General Virology, 98(4), 821–834. https://doi.org/10.1099/jgv.0.000728

Titanji, B. K., Pillay, D., & Jolly, C. (2017). Combination antiretroviral therapy and cell–cell spread of wild-type and drug-resistant human immunodeficiency virus-1. Journal of General Virology, 98(4), 821–834. https://doi.org/10.1099/jgv.0.000728

Tlou, B., Sartorius, B., & Tanser, F. (2017). Space-time patterns in maternal and mother mortality in a rural South African population with high HIV prevalence (2000–2014): results from a population-based cohort. BMC Public Health, 17(1). https://doi.org/10.1186/s12889-017-4463-9

Tlou, B., Sartorius, B., & Tanser, F. (2017). Space-time patterns in maternal and mother mortality in a rural South African population with high HIV prevalence (2000–2014): results from a population-based cohort. BMC Public Health, 17(1). https://doi.org/10.1186/s12889-017-4463-9

Tlou, B., Sartorius, B., & Tanser, F. (2017). Space-time variations in child mortality in a rural South African population with high HIV prevalence (2000–2014). PLOS ONE, 12(8), e0182478. https://doi.org/10.1371/journal.pone.0182478

Tlou, B., Sartorius, B., & Tanser, F. (2017). Space-time variations in child mortality in a rural South African population with high HIV prevalence (2000–2014). PLOS ONE, 12(8), e0182478. https://doi.org/10.1371/journal.pone.0182478

Tomita, A., Vandormael, A. M., Bärnighausen, T., de Oliveira, T., & Tanser, F. (2017). Social Disequilibrium and the Risk of HIV Acquisition: A Multilevel Study in Rural KwaZulu-Natal Province, South Africa. JAIDS Journal of Acquired Immune Deficiency Syndromes, 75(2), 164–174. https://doi.org/10.1097/QAI.0000000000001349

 

Tomita, A., Vandormael, A. M., Bärnighausen, T., de Oliveira, T., & Tanser, F. (2017). Social Disequilibrium and the Risk of HIV Acquisition: A Multilevel Study in Rural KwaZulu-Natal Province, South Africa. JAIDS Journal of Acquired Immune Deficiency Syndromes, 75(2), 164–174. https://doi.org/10.1097/QAI.0000000000001349

 

Tomita, A., Vandormael, A. M., Cuadros, D., Di Minin, E., Heikinheimo, V., Tanser, F., … Burns, J. K. (2017). Green environment and incident depression in South Africa: a geospatial analysis and mental health implications in a resource-limited setting. The Lancet Planetary Health, 1(4), e152–e162. https://doi.org/10.1016/S2542-5196(17)30063-3

Tomita, A., Vandormael, A. M., Cuadros, D., Di Minin, E., Heikinheimo, V., Tanser, F., … Burns, J. K. (2017). Green environment and incident depression in South Africa: a geospatial analysis and mental health implications in a resource-limited setting. The Lancet Planetary Health, 1(4), e152–e162. https://doi.org/10.1016/S2542-5196(17)30063-3

Tostevin, A., White, E., Dunn, D., Croxford, S., Delpech, V., Williams, I., … Bradley?Stewart, A. (2017). Recent trends and patterns in HIV?1 transmitted drug resistance in the United Kingdom. HIV Medicine, 18(3), 204–213. https://doi.org/10.1111/hiv.12414 

Tostevin, A., White, E., Dunn, D., Croxford, S., Delpech, V., Williams, I., … Bradley?Stewart, A. (2017). Recent trends and patterns in HIV?1 transmitted drug resistance in the United Kingdom. HIV Medicine, 18(3), 204–213. https://doi.org/10.1111/hiv.12414 

Turbé, V., Gray, E. R., Lawson, V. E., Nastouli, E., Brookes, J. C., Weiss, R. A., … McKendry, R. A. (2017). Towards an ultra-rapid smartphone- connected test for infectious diseases. Scientific Reports, 7(1), 11971. https://doi.org/10.1038/s41598-017-11887-6

Turbé, V., Gray, E. R., Lawson, V. E., Nastouli, E., Brookes, J. C., Weiss, R. A., … McKendry, R. A. (2017). Towards an ultra-rapid smartphone- connected test for infectious diseases. Scientific Reports, 7(1), 11971. https://doi.org/10.1038/s41598-017-11887-6

van der Heijden, Y. F., Karim, F., Mufamadi, G., Zako, L., Chinappa, T., Shepherd, B. E., … Pym, A. S. (2017). Isoniazid-monoresistant tuberculosis is associated with poor treatment outcomes in Durban, South Africa. The International Journal of Tuberculosis and Lung Disease, 21(6), 670–676. https://doi.org/10.5588/ijtld.16.0843

van der Heijden, Y. F., Karim, F., Mufamadi, G., Zako, L., Chinappa, T., Shepherd, B. E., … Pym, A. S. (2017). Isoniazid-monoresistant tuberculosis is associated with poor treatment outcomes in Durban, South Africa. The International Journal of Tuberculosis and Lung Disease, 21(6), 670–676. https://doi.org/10.5588/ijtld.16.0843

Vandormael, A., Bärnighausen, T., Herbeck, J., Tomita, A., Phillips, A., Pillay, D., … Tanser, F. (2017). Longitudinal trends in the prevalence of detectable HIV viremia: Population-based evidence from rural KwaZulu-Natal, South Africa. Clinical Infectious Diseases, cix976-cix976. https://doi.org/10.1093/cid/cix976

Vandormael, A., Bärnighausen, T., Herbeck, J., Tomita, A., Phillips, A., Pillay, D., … Tanser, F. (2017). Longitudinal trends in the prevalence of detectable HIV viremia: Population-based evidence from rural KwaZulu-Natal, South Africa. Clinical Infectious Diseases, cix976-cix976. https://doi.org/10.1093/cid/cix976

Vandormael, A., de Oliveira, T., Tanser, F., Bärnighausen, T., & Herbeck, J. T. (2017). High percentage of undiagnosed HIV cases within a hyperendemic South African community: a population-based study. Journal of Epidemiology and Community Health, jech-2017-209713. https://doi.org/10.1136/jech-2017-209713

 

Vandormael, A., de Oliveira, T., Tanser, F., Bärnighausen, T., & Herbeck, J. T. (2017). High percentage of undiagnosed HIV cases within a hyperendemic South African community: a population-based study. Journal of Epidemiology and Community Health, jech-2017-209713. https://doi.org/10.1136/jech-2017-209713

 

Vandormael, A., Dobra, A., Bärnighausen, T., de Oliveira, T., & Tanser, F. (2017). Incidence rate estimation, periodic testing and the limitations of the mid-point imputation approach. International Journal of Epidemiologyhttps://doi.org/10.1093/ije/dyx134

Vandormael, A., Dobra, A., Bärnighausen, T., de Oliveira, T., & Tanser, F. (2017). Incidence rate estimation, periodic testing and the limitations of the mid-point imputation approach. International Journal of Epidemiologyhttps://doi.org/10.1093/ije/dyx134

Vassall, A., Siapka, M., Foster, N., Cunnama, L., Ramma, L., Fielding, K., … Sinanovic, E. (2017). Cost-effectiveness of Xpert MTB/RIF for tuberculosis diagnosis in South Africa: a real-world cost analysis and economic evaluation. The Lancet Global Health, 5(7), e710–e719. https://doi.org/10.1016/S2214-109X(17)30205-X

Vassall, A., Siapka, M., Foster, N., Cunnama, L., Ramma, L., Fielding, K., … Sinanovic, E. (2017). Cost-effectiveness of Xpert MTB/RIF for tuberculosis diagnosis in South Africa: a real-world cost analysis and economic evaluation. The Lancet Global Health, 5(7), e710–e719. https://doi.org/10.1016/S2214-109X(17)30205-X

Vollmer, S., Harttgen, K., Alfven, T., Padayachy, J., Ghys, P., & Bärnighausen, T. (2017). The HIV Epidemic in Sub-Saharan Africa is Aging: Evidence from the Demographic and Health Surveys in Sub-Saharan Africa. AIDS and Behavior, 21(1), 101–113. https://doi.org/10.1007/s10461-016-1591-7

Vollmer, S., Harttgen, K., Alfven, T., Padayachy, J., Ghys, P., & Bärnighausen, T. (2017). The HIV Epidemic in Sub-Saharan Africa is Aging: Evidence from the Demographic and Health Surveys in Sub-Saharan Africa. AIDS and Behavior, 21(1), 101–113. https://doi.org/10.1007/s10461-016-1591-7

Vos, T., Allen, C., Arora, M., Barber, R. M., Bhutta, Z. A., Brown, A., … Murray, C. J. L. (2017). Global, regional, and national incidence, prevalence, and years lived with disability for 310 diseases and injuries, 1990–2015: a systematic analysis for the Global Burden of Disease Study 2015. The Lancet, 388(10053), 1545–1602. https://doi.org/10.1016/S0140-6736(16)31678-6

Vos, T., Allen, C., Arora, M., Barber, R. M., Bhutta, Z. A., Brown, A., … Murray, C. J. L. (2017). Global, regional, and national incidence, prevalence, and years lived with disability for 310 diseases and injuries, 1990–2015: a systematic analysis for the Global Burden of Disease Study 2015. The Lancet, 388(10053), 1545–1602. https://doi.org/10.1016/S0140-6736(16)31678-6

Walsh, F. J., Bärnighausen, T., Delva, W., Fleming, Y., Khumalo, G., Lejeune, C. L., … Okello, V. (2017). Impact of early initiation versus national standard of care of antiretroviral therapy in Swaziland’s public sector health system: study protocol for a stepped-wedge randomized trial. Trials, 18(1), 383. https://doi.org/10.1186/s13063-017-2128-8

Walsh, F. J., Bärnighausen, T., Delva, W., Fleming, Y., Khumalo, G., Lejeune, C. L., … Okello, V. (2017). Impact of early initiation versus national standard of care of antiretroviral therapy in Swaziland’s public sector health system: study protocol for a stepped-wedge randomized trial. Trials, 18(1), 383. https://doi.org/10.1186/s13063-017-2128-8

Wong, E. B., Ndung’u, T., & Kasprowicz, V. O. (2017). The role of mucosal-associated invariant T cells in infectious diseases. Immunology, 150(1), 45–54.  https://doi.org/10.1111/imm.12673 
Wong, E. B., Ndung’u, T., & Kasprowicz, V. O. (2017). The role of mucosal-associated invariant T cells in infectious diseases. Immunology, 150(1), 45–54.  https://doi.org/10.1111/imm.12673

Wringe, A., Moshabela, M., Nyamukapa, C., Bukenya, D., Ondenge, K., Ddaaki, W., … Renju, J. (2017). HIV testing experiences and their implications for patient engagement with HIV care and treatment on the eve of ‘test and treat’: findings from a multicountry qualitative study. Sexually Transmitted Infections, 93(Suppl 3), e052969. https://doi.org/10.1136/sextrans-2016-052969

Wringe, A., Moshabela, M., Nyamukapa, C., Bukenya, D., Ondenge, K., Ddaaki, W., … Renju, J. (2017). HIV testing experiences and their implications for patient engagement with HIV care and treatment on the eve of ‘test and treat’: findings from a multicountry qualitative study. Sexually Transmitted Infections, 93(Suppl 3), e052969. https://doi.org/10.1136/sextrans-2016-052969

Wringe, A., Renju, J., Seeley, J., Moshabela, M., & Skovdal, M. (2017). Bottlenecks to HIV care and treatment in sub-Saharan Africa: a multi-country qualitative study. Sexually Transmitted Infections, 93(Suppl 3), e053172. https://doi.org/10.1136/sextrans-2017-053172

Wringe, A., Renju, J., Seeley, J., Moshabela, M., & Skovdal, M. (2017). Bottlenecks to HIV care and treatment in sub-Saharan Africa: a multi-country qualitative study. Sexually Transmitted Infections, 93(Suppl 3), e053172. https://doi.org/10.1136/sextrans-2017-053172
Yadon, A. N., Maharaj, K., Adamson, J. H., Lai, Y.-P., Sacchettini, J. C., Ioerger, T. R., … Pym, A. S. (2017). A comprehensive characterization of PncA polymorphisms that confer resistance to pyrazinamide. Nature Communications, 8(1), 588. https://doi.org/10.1038/s41467-017-00721-2
Yadon, A. N., Maharaj, K., Adamson, J. H., Lai, Y.-P., Sacchettini, J. C., Ioerger, T. R., … Pym, A. S. (2017). A comprehensive characterization of PncA polymorphisms that confer resistance to pyrazinamide. Nature Communications, 8(1), 588. https://doi.org/10.1038/s41467-017-00721-2
Yates, T. A., Khan, P. Y., Knight, G. M., Taylor, J. G., McHugh, T. D., Lipman, M., … Abubakar, I. (n.d.). The transmission of Mycobacterium tuberculosis in high burden settings. The Lancet Infectious Diseases, 16(2), 227–238. https://doi.org/10.1016/S1473-3099(15)00499-5
Yates, T. A., Khan, P. Y., Knight, G. M., Taylor, J. G., McHugh, T. D., Lipman, M., … Abubakar, I. (n.d.). The transmission of Mycobacterium tuberculosis in high burden settings. The Lancet Infectious Diseases, 16(2), 227–238. https://doi.org/10.1016/S1473-3099(15)00499-5
Zhou, B., Bentham, J., Di Cesare, M., Bixby, H., Danaei, G., Cowan, M. J., … Zuñiga Cisneros, J. (n.d.). Worldwide trends in blood pressure from 1975 to 2015: a pooled analysis of 1479 population-based measurement studies with 19·1 million participants. The Lancet, 389(10064), 37–55. https://doi.org/10.1016/S0140-6736(16)31919-5
Zhou, B., Bentham, J., Di Cesare, M., Bixby, H., Danaei, G., Cowan, M. J., … Zuñiga Cisneros, J. (n.d.). Worldwide trends in blood pressure from 1975 to 2015: a pooled analysis of 1479 population-based measurement studies with 19·1 million participants. The Lancet, 389(10064), 37–55. https://doi.org/10.1016/S0140-6736(16)31919-5
Zhou, B., Bentham, J., Di Cesare, M., Bixby, H., Danaei, G., Cowan, M. J., … Zuñiga Cisneros, J. (n.d.). Worldwide trends in blood pressure from 1975 to 2015: a pooled analysis of 1479 population-based measurement studies with 19·1 million participants. The Lancet, 389(10064), 37–55. https://doi.org/10.1016/S0140-6736(16)31919-5
Zhou, B., Bentham, J., Di Cesare, M., Bixby, H., Danaei, G., Cowan, M. J., … Zuñiga Cisneros, J. (n.d.). Worldwide trends in blood pressure from 1975 to 2015: a pooled analysis of 1479 population-based measurement studies with 19·1 million participants. The Lancet, 389(10064), 37–55. https://doi.org/10.1016/S0140-6736(16)31919-5
Zhukova, A., Cutino-Moguel, T., Gascuel, O., & Pillay, D. (2017). The Role of Phylogenetics as a Tool to Predict the Spread of Resistance. The Journal of Infectious Diseases, jix411-jix411. https://doi.org/10.1093/infdis/jix411
Zhukova, A., Cutino-Moguel, T., Gascuel, O., & Pillay, D. (2017). The Role of Phylogenetics as a Tool to Predict the Spread of Resistance. The Journal of Infectious Diseases, jix411-jix411. https://doi.org/10.1093/infdis/jix411
Zhukova, A., Cutino-Moguel, T., Gascuel, O., & Pillay, D. (2017). The Role of Phylogenetics as a Tool to Predict the Spread of Resistance. The Journal of Infectious Diseases, jix411-jix411. https://doi.org/10.1093/infdis/jix411
Zhukova, A., Cutino-Moguel, T., Gascuel, O., & Pillay, D. (2017). The Role of Phylogenetics as a Tool to Predict the Spread of Resistance. The Journal of Infectious Diseases, jix411-jix411. https://doi.org/10.1093/infdis/jix411
Zulu, M., Naidoo, K., Mncube, Z., Jaggernath, M., Goulder, P. J., Ndung’u, T., … Thobakgale, C. F. (2017). Reduced Expression of Siglec-7, NKG2A and CD57 on Terminally Differentiated CD56-CD16+ NK Cell Subset is associated with NK Cell Dysfunction in Chronic HIV-1 clade C Infection. AIDS Research and Human Retroviruseshttps://doi.org/10.1089/AID.2017.0095
Zulu, M., Naidoo, K., Mncube, Z., Jaggernath, M., Goulder, P. J., Ndung’u, T., … Thobakgale, C. F. (2017). Reduced Expression of Siglec-7, NKG2A and CD57 on Terminally Differentiated CD56-CD16+ NK Cell Subset is associated with NK Cell Dysfunction in Chronic HIV-1 clade C Infection. AIDS Research and Human Retroviruseshttps://doi.org/10.1089/AID.2017.0095
Zulu, M., Naidoo, K., Mncube, Z., Jaggernath, M., Goulder, P. J., Ndung’u, T., … Thobakgale, C. F. (2017). Reduced Expression of Siglec-7, NKG2A and CD57 on Terminally Differentiated CD56-CD16+ NK Cell Subset is associated with NK Cell Dysfunction in Chronic HIV-1 clade C Infection. AIDS Research and Human Retroviruseshttps://doi.org/10.1089/AID.2017.0095
Zulu, M., Naidoo, K., Mncube, Z., Jaggernath, M., Goulder, P. J., Ndung’u, T., … Thobakgale, C. F. (2017). Reduced Expression of Siglec-7, NKG2A and CD57 on Terminally Differentiated CD56-CD16+ NK Cell Subset is associated with NK Cell Dysfunction in Chronic HIV-1 clade C Infection. AIDS Research and Human Retroviruseshttps://doi.org/10.1089/AID.2017.0095
Zuma, T., Wight, D., Rochat, T., & Moshabela, M. (2017). Traditional health practitioners’ management of HIV/AIDS in rural South Africa in the era of widespread antiretroviral therapy. Global Health Action, 10(1), 1352210. https://doi.org/10.1080/16549716.2017.1352210
2016 Publications

Aicken, C. R. H., Fuller, S. S., Sutcliffe, L. J., Estcourt, C. S., Gkatzidou, V., Oakeshott, P., … Shahmanesh, M. (2016). Young people’s perceptions of smartphone-enabled self-testing and online care for sexually transmitted infections: qualitative interview study. BMC Public Health, 16(1), 974. https://doi.org/10.1186/s12889-016-3648-y

Aicken, C. R. H., Fuller, S. S., Sutcliffe, L. J., Estcourt, C. S., Gkatzidou, V., Oakeshott, P., … Shahmanesh, M. (2016). Young people’s perceptions of smartphone-enabled self-testing and online care for sexually transmitted infections: qualitative interview study. BMC Public Health, 16(1), 974. https://doi.org/10.1186/s12889-016-3648-y

Atun, R., Chang, A. Y., Ogbuoji, O., Silva, S., Resch, S., Hontelez, J., & Bärnighausen, T. (2016). Long-term financing needs for HIV control in sub-Saharan Africa in 2015–2050: a modelling study. BMJ Open, 6(3). https://doi.org/10.1136/bmjopen-2015-009656

Atun, R., Chang, A. Y., Ogbuoji, O., Silva, S., Resch, S., Hontelez, J., & Bärnighausen, T. (2016). Long-term financing needs for HIV control in sub-Saharan Africa in 2015–2050: a modelling study. BMJ Open, 6(3). https://doi.org/10.1136/bmjopen-2015-009656

Barnhart, D., Hertzmark, E., Liu, E., Mungure, E., Muya, A. N., Sando, D., … Spiegelman, D. (2016). Intra-cluster correlation estimates for HIV-related outcomes from care and treatment clinics in Dar es Salaam, Tanzania. Contemporary Clinical Trials Communications, 4, 161–169. https://doi.org/10.1016/j.conctc.2016.09.001

Barnhart, D., Hertzmark, E., Liu, E., Mungure, E., Muya, A. N., Sando, D., … Spiegelman, D. (2016). Intra-cluster correlation estimates for HIV-related outcomes from care and treatment clinics in Dar es Salaam, Tanzania. Contemporary Clinical Trials Communications, 4, 161–169. https://doi.org/10.1016/j.conctc.2016.09.001

BCCP: Botswana Combination Prevention Project. clinicaltrials.gov. 2015. https://clinicaltrials.gov/ct2/show/NCT01965470. Accessed 1 Sept 2016. (n.d.). Retrieved from https://clinicaltrials.gov/ct2/show/NCT01965470

BCCP: Botswana Combination Prevention Project. clinicaltrials.gov. 2015. https://clinicaltrials.gov/ct2/show/NCT01965470. Accessed 1 Sept 2016. (n.d.). Retrieved from https://clinicaltrials.gov/ct2/show/NCT01965470

Bohlius, J., Maxwell, N., Spoerri, A., Wainwright, R., Sawry, S., Poole, J., … for IeDEA-Southern Africa. (2016). Incidence of AIDS-Defining and Other Cancers in HIV-Positive Children in South Africa: Record Linkage Study. The Pediatric Infectious Disease Journal, 35(6), e164–e170. https://doi.org/10.1097/INF.0000000000001117

Bohlius, J., Maxwell, N., Spoerri, A., Wainwright, R., Sawry, S., Poole, J., … for IeDEA-Southern Africa. (2016). Incidence of AIDS-Defining and Other Cancers in HIV-Positive Children in South Africa: Record Linkage Study. The Pediatric Infectious Disease Journal, 35(6), e164–e170. https://doi.org/10.1097/INF.0000000000001117

 

Boullé, M., Müller, T. G., Dähling, S., Ganga, Y., Jackson, L., Mahamed, D., … Sigal, A. (2016). HIV Cell-to-Cell Spread Results in Earlier Onset of Viral Gene Expression by Multiple Infections per Cell. PLOS Pathogens, 12(11), e1005964. https://doi.org/10.1371/journal.ppat.1005964

 

Boullé, M., Müller, T. G., Dähling, S., Ganga, Y., Jackson, L., Mahamed, D., … Sigal, A. (2016). HIV Cell-to-Cell Spread Results in Earlier Onset of Viral Gene Expression by Multiple Infections per Cell. PLOS Pathogens, 12(11), e1005964. https://doi.org/10.1371/journal.ppat.1005964

Boyer, S., Iwuji, C., Gosset, A., Protopopescu, C., Okesola, N., Plazy, M., … on behalf of the ANRS 12249 TasP study group. (2016). Factors associated with antiretroviral treatment initiation amongst HIV-positive individuals linked to care within a universal test and treat programme: early findings of the ANRS 12249 TasP trial in rural South Africa. AIDS Care, 28(Suppl 3), 39–51. https://doi.org/10.1080/09540121.2016.1164808

Boyer, S., Iwuji, C., Gosset, A., Protopopescu, C., Okesola, N., Plazy, M., … on behalf of the ANRS 12249 TasP study group. (2016). Factors associated with antiretroviral treatment initiation amongst HIV-positive individuals linked to care within a universal test and treat programme: early findings of the ANRS 12249 TasP trial in rural South Africa. AIDS Care, 28(Suppl 3), 39–51. https://doi.org/10.1080/09540121.2016.1164808

Brice, J., Sylla, M., Sayon, S., Telly, F., Bocar-Fofana, D., Murphy, R., … Maiga, A. I. (2016). Qualitative and quantitative HIV antibodies and viral reservoir size characterization in vertically infected children with virological suppression. Journal of Antimicrobial Chemotherapy, dkw537. https://doi.org/10.1093/jac/dkw537

Brice, J., Sylla, M., Sayon, S., Telly, F., Bocar-Fofana, D., Murphy, R., … Maiga, A. I. (2016). Qualitative and quantitative HIV antibodies and viral reservoir size characterization in vertically infected children with virological suppression. Journal of Antimicrobial Chemotherapy, dkw537. https://doi.org/10.1093/jac/dkw537

Bärnighausen, T., Bloom, D. E., & Humair, S. (2016). Human Resources for Treating HIV/AIDS: Are the Preventive Effects of Antiretroviral Treatment a Game Changer? PLOS ONE, 11(10), e0163960. https://doi.org/10.1371/journal.pone.0163960

Bärnighausen, T., Bloom, D. E., & Humair, S. (2016). Human Resources for Treating HIV/AIDS: Are the Preventive Effects of Antiretroviral Treatment a Game Changer? PLOS ONE, 11(10), e0163960. https://doi.org/10.1371/journal.pone.0163960

Byrne, E. H., Anahtar, M. N., Cohen, K. E., Moodley, A., Padavattan, N., Ismail, N., … Kwon, D. S. (2016). Association between injectable progestin-only contraceptives and HIV acquisition and HIV target cell frequency in the female genital tract in South African women: a prospective cohort study. The Lancet Infectious Diseases, 16(4), 441–448. https://doi.org/10.1016/S1473-3099(15)00429-6

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Karat, A. S., Omar, T., von Gottberg, A., Tlali, M., Chihota, V. N., Churchyard, G. J., … Grant, A. D. (2016). Autopsy Prevalence of Tuberculosis and Other Potentially Treatable Infections among Adults with Advanced HIV Enrolled in Out-Patient Care in South Africa. PLOS ONE, 11(11), e0166158. https://doi.org/10.1371/journal.pone.0166158

Karat, A. S., Omar, T., von Gottberg, A., Tlali, M., Chihota, V. N., Churchyard, G. J., … Grant, A. D. (2016). Autopsy Prevalence of Tuberculosis and Other Potentially Treatable Infections among Adults with Advanced HIV Enrolled in Out-Patient Care in South Africa. PLOS ONE, 11(11), e0166158. https://doi.org/10.1371/journal.pone.0166158

Karnon, J., & Orji, N. (2016). Option B+ for the prevention of mother-to-child transmission of HIV infection in developing countries: a review of published cost-effectiveness analyses. Health Policy Plan, 31. https://doi.org/10.1093/heapol/czw025

Karnon, J., & Orji, N. (2016). Option B+ for the prevention of mother-to-child transmission of HIV infection in developing countries: a review of published cost-effectiveness analyses. Health Policy Plan, 31. https://doi.org/10.1093/heapol/czw025

Kasprowicz, V. O., Cheng, T.-Y., Ndung’u, T., Sunpath, H., Moody, D. B., & Kasmar, A. G. (2016). HIV Disrupts Human T Cells That Target Mycobacterial Glycolipids. Journal of Infectious Diseases, 213(4), 628–633. https://doi.org/10.1093/infdis/jiv455

Kasprowicz, V. O., Cheng, T.-Y., Ndung’u, T., Sunpath, H., Moody, D. B., & Kasmar, A. G. (2016). HIV Disrupts Human T Cells That Target Mycobacterial Glycolipids. Journal of Infectious Diseases, 213(4), 628–633. https://doi.org/10.1093/infdis/jiv455

Kassebaum, N. J., Arora, M., Barber, R. M., Bhutta, Z. A., Brown, J., Carter, A., … Murray, C. J. L. (2016). Global, regional, and national disability-adjusted life-years (DALYs) for 315 diseases and injuries and healthy life expectancy (HALE), 1990–2015: a systematic analysis for the Global Burden of Disease Study 2015. The Lancet, 388(10053), 1603–1658. https://doi.org/10.1016/S0140-6736(16)31460-X

Kassebaum, N. J., Arora, M., Barber, R. M., Bhutta, Z. A., Brown, J., Carter, A., … Murray, C. J. L. (2016). Global, regional, and national disability-adjusted life-years (DALYs) for 315 diseases and injuries and healthy life expectancy (HALE), 1990–2015: a systematic analysis for the Global Burden of Disease Study 2015. The Lancet, 388(10053), 1603–1658. https://doi.org/10.1016/S0140-6736(16)31460-X

Kassebaum, N. J., Barber, R. M., Bhutta, Z. A., Dandona, L., Gething, P. W., Hay, S. I., … Murray, C. J. L. (2016). Global, regional, and national levels of maternal mortality, 1990–2015: a systematic analysis for the Global Burden of Disease Study 2015. The Lancet, 388(10053), 1775–1812. https://doi.org/10.1016/S0140-6736(16)31470-2

Kassebaum, N. J., Barber, R. M., Bhutta, Z. A., Dandona, L., Gething, P. W., Hay, S. I., … Murray, C. J. L. (2016). Global, regional, and national levels of maternal mortality, 1990–2015: a systematic analysis for the Global Burden of Disease Study 2015. The Lancet, 388(10053), 1775–1812. https://doi.org/10.1016/S0140-6736(16)31470-2

Kløverpris, H. N., Kazer, S. W., Mjösberg, J., Mabuka, J. M., Wellmann, A., Ndhlovu, Z., … Leslie, A. (2016). Innate Lymphoid Cells Are Depleted Irreversibly during Acute HIV-1 Infection in the Absence of Viral Suppression. Immunity, 44(2), 391–405. https://doi.org/10.1016/j.immuni.2016.01.006

Kløverpris, H. N., Kazer, S. W., Mjösberg, J., Mabuka, J. M., Wellmann, A., Ndhlovu, Z., … Leslie, A. (2016). Innate Lymphoid Cells Are Depleted Irreversibly during Acute HIV-1 Infection in the Absence of Viral Suppression. Immunity, 44(2), 391–405. https://doi.org/10.1016/j.immuni.2016.01.006

Koofhethile, C. K., Ndhlovu, Z. M., Thobakgale-Tshabalala, C., Prado, J. G., Ismail, N., Mncube, Z., … Ndung’u, T. (2016). CD8 + T Cell Breadth and Ex Vivo Virus Inhibition Capacity Distinguish between Viremic Controllers with and without Protective HLA Class I Alleles. Journal of Virology, 90(15), 6818–6831. https://doi.org/10.1128/JVI.00276-16

Koofhethile, C. K., Ndhlovu, Z. M., Thobakgale-Tshabalala, C., Prado, J. G., Ismail, N., Mncube, Z., … Ndung’u, T. (2016). CD8 + T Cell Breadth and Ex Vivo Virus Inhibition Capacity Distinguish between Viremic Controllers with and without Protective HLA Class I Alleles. Journal of Virology, 90(15), 6818–6831. https://doi.org/10.1128/JVI.00276-16

Koto, M. V., & Maharaj, P. (2016). Difficulties facing healthcare workers in the era of AIDS treatment in Lesotho. Sahara J, 13. https://doi.org/10.1080/17290376.2016.1179588

Koto, M. V., & Maharaj, P. (2016). Difficulties facing healthcare workers in the era of AIDS treatment in Lesotho. Sahara J, 13. https://doi.org/10.1080/17290376.2016.1179588

Lamprecht, D. A., Finin, P. M., Rahman, M. A., Cumming, B. M., Russell, S. L., Jonnala, S. R., … Steyn, A. J. C. (2016). Turning the respiratory flexibility of Mycobacterium tuberculosis against itself. Nature Communications, 7, 12393. https://doi.org/10.1038/ncomms12393

Lamprecht, D. A., Finin, P. M., Rahman, M. A., Cumming, B. M., Russell, S. L., Jonnala, S. R., … Steyn, A. J. C. (2016). Turning the respiratory flexibility of Mycobacterium tuberculosis against itself. Nature Communications, 7, 12393. https://doi.org/10.1038/ncomms12393

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Manne-Goehler, J., Atun, R., Stokes, A., Goehler, A., Houinato, D., Houehanou, C., … Bärnighausen, T. (2016). Diabetes diagnosis and care in sub-Saharan Africa: pooled analysis of individual data from 12 countries. The Lancet Diabetes & Endocrinology, 4(11), 903–912. https://doi.org/10.1016/S2213-8587(16)30181-4

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Oldenburg, C. E., Perez-Brumer, A. G., Reisner, S. L., Mayer, K. H., Mimiaga, M. J., Hatzenbuehler, M. L., & Bärnighausen, T. (2016). Human rights protections and HIV prevalence among MSM who sell sex: Cross-country comparisons from a systematic review and meta-analysis. Global Public Health, 1–12. https://doi.org/10.1080/17441692.2016.1149598

Oldenburg, C. E., Perez-Brumer, A. G., Reisner, S. L., Mayer, K. H., Mimiaga, M. J., Hatzenbuehler, M. L., & Bärnighausen, T. (2016). Human rights protections and HIV prevalence among MSM who sell sex: Cross-country comparisons from a systematic review and meta-analysis. Global Public Health, 1–12. https://doi.org/10.1080/17441692.2016.1149598

Ondenge, K., Renju, J., Bonnington, O., Moshabela, M., Wamoyi, J., Nyamukapa, C., … Skovdal, M. (2017). ‘I am treated well if I adhere to my HIV medication’: putting patient–provider interactions in context through insights from qualitative research in five sub-Saharan African countries. Sexually Transmitted Infections, 93(Suppl 3), e052973. https://doi.org/10.1136/sextrans-2016-052973

Ondenge, K., Renju, J., Bonnington, O., Moshabela, M., Wamoyi, J., Nyamukapa, C., … Skovdal, M. (2017). ‘I am treated well if I adhere to my HIV medication’: putting patient–provider interactions in context through insights from qualitative research in five sub-Saharan African countries. Sexually Transmitted Infections, 93(Suppl 3), e052973. https://doi.org/10.1136/sextrans-2016-052973

Orne-Gliemann, J., Zuma, T., Chikovore, J., Gillespie, N., Grant, M., Iwuji, C., … On Behalf of the TasP Study Group. (2016). Community perceptions of repeat HIV-testing: experiences of the ANRS 12249 Treatment as Prevention trial in rural South Africa. AIDS Care, 28(sup3), 14–23. https://doi.org/10.1080/09540121.2016.1164805

Orne-Gliemann, J., Zuma, T., Chikovore, J., Gillespie, N., Grant, M., Iwuji, C., … On Behalf of the TasP Study Group. (2016). Community perceptions of repeat HIV-testing: experiences of the ANRS 12249 Treatment as Prevention trial in rural South Africa. AIDS Care, 28(sup3), 14–23. https://doi.org/10.1080/09540121.2016.1164805

PANGEA_HIV Consortium, ICONIC Project, Yebra, G., Hodcroft, E. B., Ragonnet-Cronin, M. L., Pillay, D., … Kozlakidis, Z. (2016). Using nearly full-genome HIV sequence data improves phylogeny reconstruction in a simulated epidemic. Scientific Reports, 6(1). https://doi.org/10.1038/srep39489

PANGEA_HIV Consortium, ICONIC Project, Yebra, G., Hodcroft, E. B., Ragonnet-Cronin, M. L., Pillay, D., … Kozlakidis, Z. (2016). Using nearly full-genome HIV sequence data improves phylogeny reconstruction in a simulated epidemic. Scientific Reports, 6(1). https://doi.org/10.1038/srep39489

Power, R. A., Parkhill, J., & de Oliveira, T. (2016). Microbial genome-wide association studies: lessons from human GWAS. Nature Reviews Genetics, 18(1), 41–50. https://doi.org/10.1038/nrg.2016.132

Power, R. A., Parkhill, J., & de Oliveira, T. (2016). Microbial genome-wide association studies: lessons from human GWAS. Nature Reviews Genetics, 18(1), 41–50. https://doi.org/10.1038/nrg.2016.132

Power, R. A., Tansey, K. E., Buttenschøn, H. N., Cohen-Woods, S., Bigdeli, T., Hall, L. S., … Lewis, C. M. (2017). Genome-wide Association for Major Depression Through Age at Onset Stratification: Major Depressive Disorder Working Group of the Psychiatric Genomics Consortium. Biological Psychiatry, 81(4), 325–335. https://doi.org/10.1016/j.biopsych.2016.05.010

Power, R. A., Tansey, K. E., Buttenschøn, H. N., Cohen-Woods, S., Bigdeli, T., Hall, L. S., … Lewis, C. M. (2017). Genome-wide Association for Major Depression Through Age at Onset Stratification: Major Depressive Disorder Working Group of the Psychiatric Genomics Consortium. Biological Psychiatry, 81(4), 325–335. https://doi.org/10.1016/j.biopsych.2016.05.010

Reimers, P., Israel-Ballard, K., Spies, L., Tanser, F., Thior, I., Scott Gordon, W., & Coutsoudis, A. (2016). A Protocol for a Cluster Randomized Trial on the Effect of a “feeding buddy” Program on adherence to the Prevention of Mother-To-Child-Transmission Guidelines in a Rural Area of KwaZulu-Natal, South Africa. JAIDS Journal of Acquired Immune Deficiency Syndromes, 72. Retrieved from http://journals.lww.com/jaids/Fulltext/2016/08011/A_Protocol_for_a_Cluster_Randomized_Trial_on_the.6.aspx

Reimers, P., Israel-Ballard, K., Spies, L., Tanser, F., Thior, I., Scott Gordon, W., & Coutsoudis, A. (2016). A Protocol for a Cluster Randomized Trial on the Effect of a “feeding buddy” Program on adherence to the Prevention of Mother-To-Child-Transmission Guidelines in a Rural Area of KwaZulu-Natal, South Africa. JAIDS Journal of Acquired Immune Deficiency Syndromes, 72. Retrieved from http://journals.lww.com/jaids/Fulltext/2016/08011/A_Protocol_for_a_Cluster_Randomized_Trial_on_the.6.aspx

Reimers, P., Israel-Ballard, K., Spies, L., Tanser, F., Thior, I., Scott Gordon, W., & Coutsoudis, A. (2016). A Protocol for a Cluster Randomized Trial on the Effect of a “feeding buddy” Program on adherence to the Prevention of Mother-To-Child-Transmission Guidelines in a Rural Area of KwaZulu-Natal, South Africa. JAIDS Journal of Acquired Immune Deficiency Syndromes, 72. Retrieved from http://journals.lww.com/jaids/Fulltext/2016/08011/A_Protocol_for_a_Cluster_Randomized_Trial_on_the.6.aspx

Reimers, P., Israel-Ballard, K., Spies, L., Tanser, F., Thior, I., Scott Gordon, W., & Coutsoudis, A. (2016). A Protocol for a Cluster Randomized Trial on the Effect of a “feeding buddy” Program on adherence to the Prevention of Mother-To-Child-Transmission Guidelines in a Rural Area of KwaZulu-Natal, South Africa. JAIDS Journal of Acquired Immune Deficiency Syndromes, 72. Retrieved from http://journals.lww.com/jaids/Fulltext/2016/08011/A_Protocol_for_a_Cluster_Randomized_Trial_on_the.6.aspx

Reniers, G., Wamukoya, M., Urassa, M., Nyaguara, A., Nakiyingi-Miiro, J., Lutalo, T., … Zaba, B. (2016). Data Resource Profile: Network for Analysing Longitudinal Population-based HIV/AIDS data on Africa (ALPHA Network). International Journal of Epidemiology, 45(1), 83–93. https://doi.org/10.1093/ije/dyv343

Reniers, G., Wamukoya, M., Urassa, M., Nyaguara, A., Nakiyingi-Miiro, J., Lutalo, T., … Zaba, B. (2016). Data Resource Profile: Network for Analysing Longitudinal Population-based HIV/AIDS data on Africa (ALPHA Network). International Journal of Epidemiology, 45(1), 83–93. https://doi.org/10.1093/ije/dyv343

Renju, J., Moshabela, M., McLean, E., Ddaaki, W., Skovdal, M., Odongo, F., … Wringe, A. (2017). ‘Side effects’ are ‘central effects’ that challenge retention in HIV treatment programmes in six sub-Saharan African countries: a multicountry qualitative study. Sexually Transmitted Infections, 93(Suppl 3), e052971. https://doi.org/10.1136/sextrans-2016-052971

Renju, J., Moshabela, M., McLean, E., Ddaaki, W., Skovdal, M., Odongo, F., … Wringe, A. (2017). ‘Side effects’ are ‘central effects’ that challenge retention in HIV treatment programmes in six sub-Saharan African countries: a multicountry qualitative study. Sexually Transmitted Infections, 93(Suppl 3), e052971. https://doi.org/10.1136/sextrans-2016-052971

Rochat, T. J., Mitchell, J., Lubbe, A. M., Stein, A., Tomlinson, M., & Bland, R. M. (2017). Communication about HIV and death: Maternal reports of primary school-aged children’s questions after maternal HIV disclosure in rural South Africa. Social Science & Medicine, 172, 124–134. https://doi.org/10.1016/j.socscimed.2016.10.031

Rochat, T. J., Mitchell, J., Lubbe, A. M., Stein, A., Tomlinson, M., & Bland, R. M. (2017). Communication about HIV and death: Maternal reports of primary school-aged children’s questions after maternal HIV disclosure in rural South Africa. Social Science & Medicine, 172, 124–134. https://doi.org/10.1016/j.socscimed.2016.10.031

 Rochat, T. J., Mitchell, J., Stein, A., Mkwanazi, N. B., & Bland, R. M. (2016). The Amagugu Intervention: A Conceptual Framework for Increasing HIV Disclosure and Parent-Led Communication about Health among HIV-Infected Parents with HIV-Uninfected Primary School-Aged Children. Frontiers in Public Health, 4. https://doi.org/10.3389/fpubh.2016.00183

 Rochat, T. J., Mitchell, J., Stein, A., Mkwanazi, N. B., & Bland, R. M. (2016). The Amagugu Intervention: A Conceptual Framework for Increasing HIV Disclosure and Parent-Led Communication about Health among HIV-Infected Parents with HIV-Uninfected Primary School-Aged Children. Frontiers in Public Health, 4. https://doi.org/10.3389/fpubh.2016.00183

Saini, V., Cumming, B. M., Guidry, L., Lamprecht, D. A., Adamson, J. H., Reddy, V. P., … Steyn, A. J. C. (2016). Ergothioneine Maintains Redox and Bioenergetic Homeostasis Essential for Drug Susceptibility and Virulence of Mycobacterium tuberculosis. Cell Reports, 14(3), 572–585. https://doi.org/10.1016/j.celrep.2015.12.056

Saini, V., Cumming, B. M., Guidry, L., Lamprecht, D. A., Adamson, J. H., Reddy, V. P., … Steyn, A. J. C. (2016). Ergothioneine Maintains Redox and Bioenergetic Homeostasis Essential for Drug Susceptibility and Virulence of Mycobacterium tuberculosis. Cell Reports, 14(3), 572–585. https://doi.org/10.1016/j.celrep.2015.12.056

Seo, H. S., Kim, H., Hwang, S. M., Hong, S. H., & Lee, I. Y. (2016). Predictors of job satisfaction and burnout among tuberculosis management nurses and physicians. Epidemiol Health, 38. https://doi.org/10.4178/epih.e2016008

Seo, H. S., Kim, H., Hwang, S. M., Hong, S. H., & Lee, I. Y. (2016). Predictors of job satisfaction and burnout among tuberculosis management nurses and physicians. Epidemiol Health, 38. https://doi.org/10.4178/epih.e2016008

Shahmanesh, M., Schultze, A., Burns, F., Kirk, O., Lundgren, J., Mussini, C., … on behalf of EuroSIDA in EuroCOORD. (2016). The cardiovascular risk management for people living with HIV in Europe:  how well are we doing? AIDS, 30(16). Retrieved from http://journals.lww.com/aidsonline/Fulltext/2016/10230/The_cardiovascular_risk_management_for_people.12.aspx

Shahmanesh, M., Schultze, A., Burns, F., Kirk, O., Lundgren, J., Mussini, C., … on behalf of EuroSIDA in EuroCOORD. (2016). The cardiovascular risk management for people living with HIV in Europe:  how well are we doing? AIDS, 30(16). Retrieved from http://journals.lww.com/aidsonline/Fulltext/2016/10230/The_cardiovascular_risk_management_for_people.12.aspx

Simoni, Y., Fehlings, M., Kløverpris, H. N., McGovern, N., Koo, S.-L., Loh, C. Y., … Newell, E. W. (2017). Human Innate Lymphoid Cell Subsets Possess Tissue-Type Based Heterogeneity in Phenotype and Frequency. Immunity, 46(1), 148–161. https://doi.org/10.1016/j.immuni.2016.11.005

Simoni, Y., Fehlings, M., Kløverpris, H. N., McGovern, N., Koo, S.-L., Loh, C. Y., … Newell, E. W. (2017). Human Innate Lymphoid Cell Subsets Possess Tissue-Type Based Heterogeneity in Phenotype and Frequency. Immunity, 46(1), 148–161. https://doi.org/10.1016/j.immuni.2016.11.005

Skovdal, M., Wringe, A., Seeley, J., Renju, J., Paparini, S., Wamoyi, J., … Bonnington, O. (2017). Using theories of practice to understand HIV-positive persons varied engagement with HIV services: a qualitative study in six Sub-Saharan African countries. Sexually Transmitted Infections, 93(Suppl 3). https://doi.org/10.1136/sextrans-2016-052977

Skovdal, M., Wringe, A., Seeley, J., Renju, J., Paparini, S., Wamoyi, J., … Bonnington, O. (2017). Using theories of practice to understand HIV-positive persons varied engagement with HIV services: a qualitative study in six Sub-Saharan African countries. Sexually Transmitted Infections, 93(Suppl 3). https://doi.org/10.1136/sextrans-2016-052977

Surolia, R., Karki, S., Wang, Z., Kulkarni, T., Li, F. J., Vohra, S., … Antony, V. B. (2016). Attenuated heme oxygenase-1 responses predispose the elderly to pulmonary nontuberculous mycobacterial infections. American Journal of Physiology - Lung Cellular and Molecular Physiology, 311(5), L928–L940. https://doi.org/10.1152/ajplung.00397.2015

Surolia, R., Karki, S., Wang, Z., Kulkarni, T., Li, F. J., Vohra, S., … Antony, V. B. (2016). Attenuated heme oxygenase-1 responses predispose the elderly to pulmonary nontuberculous mycobacterial infections. American Journal of Physiology - Lung Cellular and Molecular Physiology, 311(5), L928–L940. https://doi.org/10.1152/ajplung.00397.2015

Surolia, R., Karki, S., Wang, Z., Kulkarni, T., Li, F. J., Vohra, S., … Antony, V. B. (2016). Attenuated heme oxygenase-1 responses predispose the elderly to pulmonary nontuberculous mycobacterial infections. American Journal of Physiology - Lung Cellular and Molecular Physiology, 311(5), L928–L940. https://doi.org/10.1152/ajplung.00397.2015

Surolia, R., Karki, S., Wang, Z., Kulkarni, T., Li, F. J., Vohra, S., … Antony, V. B. (2016). Attenuated heme oxygenase-1 responses predispose the elderly to pulmonary nontuberculous mycobacterial infections. American Journal of Physiology - Lung Cellular and Molecular Physiology, 311(5), L928–L940. https://doi.org/10.1152/ajplung.00397.2015

Sutherland, K. A., Collier, D. A., Claiborne, D. T., Prince, J. L., Deymier, M. J., Goldstein, R. A., … Gupta, R. K. (2016). Wide variation in susceptibility of transmitted/founder HIV-1 subtype C Isolates to protease inhibitors and association with in vitro replication efficiency. Scientific Reports, 6(1). https://doi.org/10.1038/srep38153

Sutherland, K. A., Collier, D. A., Claiborne, D. T., Prince, J. L., Deymier, M. J., Goldstein, R. A., … Gupta, R. K. (2016). Wide variation in susceptibility of transmitted/founder HIV-1 subtype C Isolates to protease inhibitors and association with in vitro replication efficiency. Scientific Reports, 6(1). https://doi.org/10.1038/srep38153

The EuroCoord-CHAIN-EPPICC joint project study group, Ngo-Giang-Huong, N., Wittkop, L., Judd, A., Reiss, P., Goetghebuer, T., … Lallemant, M. (2016). Prevalence and effect of pre-treatment drug resistance on the virological response to antiretroviral treatment initiated in HIV-infected children – a EuroCoord-CHAIN-EPPICC joint project. BMC Infectious Diseases, 16(1). https://doi.org/10.1186/s12879-016-1968-2

The EuroCoord-CHAIN-EPPICC joint project study group, Ngo-Giang-Huong, N., Wittkop, L., Judd, A., Reiss, P., Goetghebuer, T., … Lallemant, M. (2016). Prevalence and effect of pre-treatment drug resistance on the virological response to antiretroviral treatment initiated in HIV-infected children – a EuroCoord-CHAIN-EPPICC joint project. BMC Infectious Diseases, 16(1). https://doi.org/10.1186/s12879-016-1968-2

Tlou, B., Sartorius, B., & Tanser, F. (2016). Spatial-temporal dynamics and structural determinants of child and maternal mortality in a rural, high HIV burdened South African population, 2000–2014: a study protocol. BMJ Open, 6(7), e010013. https://doi.org/10.1136/bmjopen-2015-010013

Tlou, B., Sartorius, B., & Tanser, F. (2016). Spatial-temporal dynamics and structural determinants of child and maternal mortality in a rural, high HIV burdened South African population, 2000–2014: a study protocol. BMJ Open, 6(7), e010013. https://doi.org/10.1136/bmjopen-2015-010013

Treffry-Goatley, A., Lessells, R., Sykes, P., Bärnighausen, T., de Oliveira, T., Moletsane, R., & Seeley, J. (2016). Understanding Specific Contexts of Antiretroviral Therapy Adherence in Rural South Africa: A Thematic Analysis of Digital Stories from a Community with High HIV Prevalence. PLOS ONE, 11(2), e0148801. https://doi.org/10.1371/journal.pone.0148801

Treffry-Goatley, A., Lessells, R., Sykes, P., Bärnighausen, T., de Oliveira, T., Moletsane, R., & Seeley, J. (2016). Understanding Specific Contexts of Antiretroviral Therapy Adherence in Rural South Africa: A Thematic Analysis of Digital Stories from a Community with High HIV Prevalence. PLOS ONE, 11(2), e0148801. https://doi.org/10.1371/journal.pone.0148801

van Rooyen, H., Essack, Z., Rochat, T., Wight, D., Knight, L., Bland, R., & Celum, C. (2016). Taking HIV Testing to Families: Designing a Family-Based Intervention to Facilitate HIV Testing, Disclosure, and Intergenerational Communication. Frontiers in Public Health, 4. https://doi.org/10.3389/fpubh.2016.00154

van Rooyen, H., Essack, Z., Rochat, T., Wight, D., Knight, L., Bland, R., & Celum, C. (2016). Taking HIV Testing to Families: Designing a Family-Based Intervention to Facilitate HIV Testing, Disclosure, and Intergenerational Communication. Frontiers in Public Health, 4. https://doi.org/10.3389/fpubh.2016.00154

van Rooyen, H., Essack, Z., Rochat, T., Wight, D., Knight, L., Bland, R., & Celum, C. (2016). Taking HIV Testing to Families: Designing a Family-Based Intervention to Facilitate HIV Testing, Disclosure, and Intergenerational Communication. Frontiers in Public Health, 4. https://doi.org/10.3389/fpubh.2016.00154

van Rooyen, H., Essack, Z., Rochat, T., Wight, D., Knight, L., Bland, R., & Celum, C. (2016). Taking HIV Testing to Families: Designing a Family-Based Intervention to Facilitate HIV Testing, Disclosure, and Intergenerational Communication. Frontiers in Public Health, 4. https://doi.org/10.3389/fpubh.2016.00154

Vandormael, A. M., Boulware, D. R., Tanser, F. C., Bärnighausen, T. W., Stott, K. E., & de Oliveira, T. (2016). Brief Report: Virologic Monitoring Can Be a Cost-Effective Strategy to Diagnose Treatment Failure on First-Line ART. Journal of Acquired Immune Deficiency Syndromes (1999), 71(4), 462–466. https://doi.org/10.1097/QAI.0000000000000870

Vandormael, A. M., Boulware, D. R., Tanser, F. C., Bärnighausen, T. W., Stott, K. E., & de Oliveira, T. (2016). Brief Report: Virologic Monitoring Can Be a Cost-Effective Strategy to Diagnose Treatment Failure on First-Line ART. Journal of Acquired Immune Deficiency Syndromes (1999), 71(4), 462–466. https://doi.org/10.1097/QAI.0000000000000870

Vandormael, A. M., Boulware, D. R., Tanser, F. C., Bärnighausen, T. W., Stott, K. E., & de Oliveira, T. (2016). Brief Report: Virologic Monitoring Can Be a Cost-Effective Strategy to Diagnose Treatment Failure on First-Line ART. Journal of Acquired Immune Deficiency Syndromes (1999), 71(4), 462–466. https://doi.org/10.1097/QAI.0000000000000870

Vandormael, A. M., Boulware, D. R., Tanser, F. C., Bärnighausen, T. W., Stott, K. E., & de Oliveira, T. (2016). Brief Report: Virologic Monitoring Can Be a Cost-Effective Strategy to Diagnose Treatment Failure on First-Line ART. Journal of Acquired Immune Deficiency Syndromes (1999), 71(4), 462–466. https://doi.org/10.1097/QAI.0000000000000870

Wamoyi, J., Renju, J., Moshabela, M., McLean, E., Nyato, D., Mbata, D., … Wringe, A. (2017). Understanding the relationship between couple dynamics and engagement with HIV care services: insights from a qualitative study in Eastern and Southern Africa. Sexually Transmitted Infections, 93(Suppl 3). https://doi.org/10.1136/sextrans-2016-052976

Wamoyi, J., Renju, J., Moshabela, M., McLean, E., Nyato, D., Mbata, D., … Wringe, A. (2017). Understanding the relationship between couple dynamics and engagement with HIV care services: insights from a qualitative study in Eastern and Southern Africa. Sexually Transmitted Infections, 93(Suppl 3). https://doi.org/10.1136/sextrans-2016-052976

Wang, H., Bhutta, Z. A., Coates, M. M., Coggeshall, M., Dandona, L., Diallo, K., … Murray, C. J. L. (2016). Global, regional, national, and selected subnational levels of stillbirths, neonatal, infant, and under-5 mortality, 1980–2015: a systematic analysis for the Global Burden of Disease Study 2015. The Lancet, 388(10053), 1725–1774. https://doi.org/10.1016/S0140-6736(16)31575-6

Wang, H., Bhutta, Z. A., Coates, M. M., Coggeshall, M., Dandona, L., Diallo, K., … Murray, C. J. L. (2016). Global, regional, national, and selected subnational levels of stillbirths, neonatal, infant, and under-5 mortality, 1980–2015: a systematic analysis for the Global Burden of Disease Study 2015. The Lancet, 388(10053), 1725–1774. https://doi.org/10.1016/S0140-6736(16)31575-6

Wang, H., Naghavi, M., Allen, C., Barber, R. M., Bhutta, Z. A., Carter, A., … Murray, C. J. L. (2016). Global, regional, and national life expectancy, all-cause mortality, and cause-specific mortality for 249 causes of death, 1980–2015: a systematic analysis for the Global Burden of Disease Study 2015. The Lancet, 388(10053), 1459–1544. https://doi.org/10.1016/S0140-6736(16)31012-1

Wang, H., Naghavi, M., Allen, C., Barber, R. M., Bhutta, Z. A., Carter, A., … Murray, C. J. L. (2016). Global, regional, and national life expectancy, all-cause mortality, and cause-specific mortality for 249 causes of death, 1980–2015: a systematic analysis for the Global Burden of Disease Study 2015. The Lancet, 388(10053), 1459–1544. https://doi.org/10.1016/S0140-6736(16)31012-1

Wang, H., Wolock, T. M., Carter, A., Nguyen, G., Kyu, H. H., Gakidou, E., … Murray, C. J. L. (2016). Estimates of global, regional, and national incidence, prevalence, and mortality of HIV, 1980–2015: the Global Burden of Disease Study 2015. The Lancet HIV, 3(8), e361–e387. https://doi.org/10.1016/S2352-3018(16)30087-X

Wang, H., Wolock, T. M., Carter, A., Nguyen, G., Kyu, H. H., Gakidou, E., … Murray, C. J. L. (2016). Estimates of global, regional, and national incidence, prevalence, and mortality of HIV, 1980–2015: the Global Burden of Disease Study 2015. The Lancet HIV, 3(8), e361–e387. https://doi.org/10.1016/S2352-3018(16)30087-X

Watters, S. A., Mlcochova, P., Maldarelli, F., Goonetilleke, N., Pillay, D., & Gupta, R. K. (2016). Sequential CCR5-Tropic HIV-1 Reactivation from Distinct Cellular Reservoirs following Perturbation of Elite Control. PLOS ONE, 11(7), e0158854. https://doi.org/10.1371/journal.pone.0158854

Watters, S. A., Mlcochova, P., Maldarelli, F., Goonetilleke, N., Pillay, D., & Gupta, R. K. (2016). Sequential CCR5-Tropic HIV-1 Reactivation from Distinct Cellular Reservoirs following Perturbation of Elite Control. PLOS ONE, 11(7), e0158854. https://doi.org/10.1371/journal.pone.0158854

White, E., Smit, E., Churchill, D., Collins, S., Booth, C., Tostevin, A., … Dunn, D. T. (2016). No Evidence That HIV-1 Subtype C Infection Compromises the Efficacy of Tenofovir-Containing Regimens: Cohort Study in the United Kingdom. Journal of Infectious Diseases, 214(9), 1302–1308. https://doi.org/10.1093/infdis/jiw213

White, E., Smit, E., Churchill, D., Collins, S., Booth, C., Tostevin, A., … Dunn, D. T. (2016). No Evidence That HIV-1 Subtype C Infection Compromises the Efficacy of Tenofovir-Containing Regimens: Cohort Study in the United Kingdom. Journal of Infectious Diseases, 214(9), 1302–1308. https://doi.org/10.1093/infdis/jiw213

White, E., Smit, E., Churchill, D., Collins, S., Booth, C., Tostevin, A., … Dunn, D. T. (2016). No Evidence That HIV-1 Subtype C Infection Compromises the Efficacy of Tenofovir-Containing Regimens: Cohort Study in the United Kingdom. Journal of Infectious Diseases, 214(9), 1302–1308. https://doi.org/10.1093/infdis/jiw213

White, E., Smit, E., Churchill, D., Collins, S., Booth, C., Tostevin, A., … Dunn, D. T. (2016). No Evidence That HIV-1 Subtype C Infection Compromises the Efficacy of Tenofovir-Containing Regimens: Cohort Study in the United Kingdom. Journal of Infectious Diseases, 214(9), 1302–1308. https://doi.org/10.1093/infdis/jiw213

Wringe, A., Moshabela, M., Nyamukapa, C., Bukenya, D., Ondenge, K., Ddaaki, W., … Renju, J. (2017). HIV testing experiences and their implications for patient engagement with HIV care and treatment on the eve of ‘test and treat’: findings from a multicountry qualitative study. Sexually Transmitted Infections, 93(Suppl 3), e052969. https://doi.org/10.1136/sextrans-2016-052969

Wringe, A., Moshabela, M., Nyamukapa, C., Bukenya, D., Ondenge, K., Ddaaki, W., … Renju, J. (2017). HIV testing experiences and their implications for patient engagement with HIV care and treatment on the eve of ‘test and treat’: findings from a multicountry qualitative study. Sexually Transmitted Infections, 93(Suppl 3), e052969. https://doi.org/10.1136/sextrans-2016-052969

 Yates, T. A., Tanser, F., & Abubakar, I. (2016). Plan Beta for tuberculosis: it’s time to think seriously about poorly ventilated congregate settings. The International Journal of Tuberculosis and Lung Disease, 20(1), 5–10. https://doi.org/10.5588/ijtld.15.0494

 Yates, T. A., Tanser, F., & Abubakar, I. (2016). Plan Beta for tuberculosis: it’s time to think seriously about poorly ventilated congregate settings. The International Journal of Tuberculosis and Lung Disease, 20(1), 5–10. https://doi.org/10.5588/ijtld.15.0494

Zuma, T., Wight, D., Rochat, T., & Moshabela, M. (2016). The role of traditional health practitioners in Rural KwaZulu-Natal, South Africa: generic or mode specific? BMC Complementary and Alternative Medicine16(1). https://doi.org/10.1186/s12906-016-1293-8

Zuma, T., Wight, D., Rochat, T., & Moshabela, M. (2016). The role of traditional health practitioners in Rural KwaZulu-Natal, South Africa: generic or mode specific? BMC Complementary and Alternative Medicine16(1). https://doi.org/10.1186/s12906-016-1293-8